Pairwise Alignments

Query, 506 a.a., putative inner membrane transporter; C4-dicarboxylate anaerobic carrier family protein from Escherichia coli BL21

Subject, 509 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  630 bits (1626), Expect = 0.0
 Identities = 318/498 (63%), Positives = 390/498 (78%), Gaps = 2/498 (0%)

Query: 9   PTRRWAMPDTLVIIFFVAILTSLATWVVPVGMFDSQEVQYQVDGQTKTRKVVDPHSFRIL 68
           P ++  +PDTLVIIFFVA+   L T++VPVG F++QE+ Y  DG  K R VVDP+SFR  
Sbjct: 12  PQKKIPLPDTLVIIFFVALAAMLLTYLVPVGSFETQEIHYLADGVEKQRSVVDPNSFRFS 71

Query: 69  TNEAGEPEYHRVQLFTTGDERPGLMNFPFEGLTSGSKYGTAVGIIMFMLVIGGAFGIVMR 128
            +EAGE     V LF  G    G  NF FEGLTSGSK+GTA+G+IMFMLVIGGAFGIVM 
Sbjct: 72  LDEAGEHLKQPVALFEGGGG-VGFFNFAFEGLTSGSKWGTAIGVIMFMLVIGGAFGIVME 130

Query: 129 TGTIDNGILALIRHTRGNEILFIPALFILFSLGGAVFGMGEEAVAFAIIIAPLMVRLGYD 188
           TGTIDNGI+ LI  T+GNE LFIP LFILFSLGGAVFGMGEEA+AFAIII PLM+RLG+D
Sbjct: 131 TGTIDNGIIRLIDKTQGNERLFIPVLFILFSLGGAVFGMGEEAIAFAIIICPLMIRLGFD 190

Query: 189 SITTVLVTYIATQIGFASSWMNPFCVVVAQGIAGVPVLSGSGLRIVVWVIATMIGLIFTM 248
            ITTV+VTY+ATQ+GFASSWMNPF V +AQGIAG+PVLSG+G+R V+W   T++G+IFTM
Sbjct: 191 GITTVMVTYVATQVGFASSWMNPFSVAIAQGIAGIPVLSGAGVRGVMWAGFTLMGVIFTM 250

Query: 249 VYASRVKKNPLLSRVHESDRFFREKQADVE-QRPFTFGDWLVLIVLTAVMVWVIWGVIVN 307
            Y ++++ NP  S  +ESDR+FRE     E Q  F  GD LVL+ +   ++WVIWGV+ N
Sbjct: 251 RYGAKIQANPQSSLCYESDRYFREHHGANELQSRFNLGDSLVLLTILLTVIWVIWGVVAN 310

Query: 308 AWFIPEIASQFFTMGLVIGIIGVVFRLNGMTVNTMASSFTEGARMMIAPALLVGFAKGIL 367
           AWFIPEIASQFF MG+V+G+I V+FRLNGMT+N MA+SF +GA  M+ PALLVG A GIL
Sbjct: 311 AWFIPEIASQFFAMGIVVGMIAVIFRLNGMTLNRMATSFKQGAGTMLEPALLVGCASGIL 370

Query: 368 LLVGNGEAGDASVLNTILNSIANAISGLDNAVAAWFMLLFQAVFNFFVTSGSGQAALTMP 427
           LL+G G+  + SVLNT+LNS  + I  L    +AWFMLLFQ+VFNFFVTSGSGQAALTMP
Sbjct: 371 LLLGGGKPDEPSVLNTLLNSAGSLIGQLPAVASAWFMLLFQSVFNFFVTSGSGQAALTMP 430

Query: 428 LLAPLGDLVGVNRQVTVLAFQFGDGFSHIIYPTSASLMATLGVCRVDFRNWLKVGATLLG 487
           L+APL D+VGV+RQV VLAFQ GDGF++++ PTSASLMATLGVCRVD+  W+K     + 
Sbjct: 431 LMAPLADIVGVSRQVAVLAFQLGDGFTNVLVPTSASLMATLGVCRVDWGIWVKFIWRFML 490

Query: 488 LLFIMSSVVVIGAQLMGY 505
            LF++SS+VV+ A  +G+
Sbjct: 491 ALFLVSSLVVVAAHYLGF 508