Pairwise Alignments

Query, 341 a.a., microcin C ABC transporter permease from Escherichia coli BL21

Subject, 340 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  427 bits (1097), Expect = e-124
 Identities = 201/338 (59%), Positives = 259/338 (76%), Gaps = 1/338 (0%)

Query: 1   MSRLSPVNQARWARFRHNRRGYWSLWIFLVLFGLSLCSELIANDKPLLVRYDGSWYFPLL 60
           M   SP  + R+  F+ NRRG+WSLWIF+ L  + LC ELIANDKPLL+RYDG  Y+P+L
Sbjct: 1   MFEFSPQTRRRFDLFKANRRGWWSLWIFIGLLLVCLCGELIANDKPLLIRYDGQLYYPVL 60

Query: 61  KNYSESDFGGPLASQADYQDPWLKQRLE-NNGWVLWAPIRFGATSINFATDKPFPSPPSR 119
             Y E+DFGG L  + DY   ++++ +   NGW+L+API F   +IN+  D P PSPP  
Sbjct: 61  HTYMETDFGGELPFEPDYASDYVRKLIAAKNGWMLFAPIPFSYDTINYDLDAPSPSPPDH 120

Query: 120 QNWLGTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVLAGALQGYYGGKVDLWGQRF 179
            NWLGTD    DVLAR+L+G RIS+LF L+LT  S+V+GV AGA+QGYYGG  DL GQR 
Sbjct: 121 INWLGTDEQARDVLARVLFGARISILFALLLTAISTVIGVCAGAIQGYYGGMTDLIGQRI 180

Query: 180 IEVWSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSLVGVVRAEFLRTRNFDYIRAAQ 239
            E+WSG+P L+L+I+LS  V P+FWWLL I  LF W+SLV VVRAEFLR RN +Y++AA+
Sbjct: 181 QEIWSGLPVLYLLIILSGFVSPSFWWLLGIMALFSWLSLVDVVRAEFLRGRNLEYVKAAR 240

Query: 240 ALGVSDRSIILRHMLPNAMVATLTFLPFILCSSITTLTSLDFLGFGLPLGSPSLGELLLQ 299
           ALG++D +++ RH+LPNAM +TLT+LPFI+  +I TLT+LDFLGFG+P GS SLGEL+ +
Sbjct: 241 ALGLTDAALMWRHILPNAMTSTLTYLPFIITGAIATLTALDFLGFGMPAGSASLGELIGE 300

Query: 300 GKNNLQAPWLGITAFLSVAILLSLLIFIGEAVRDAFDP 337
            K NLQAPWLG+TAF+ +A++LSLL+FIGEA RDAFDP
Sbjct: 301 AKRNLQAPWLGLTAFVVLALILSLLVFIGEACRDAFDP 338