Pairwise Alignments

Query, 416 a.a., nucleoside permease from Escherichia coli BL21

Subject, 405 a.a., NupC/NupG family nucleoside CNT transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  332 bits (852), Expect = 9e-96
 Identities = 168/413 (40%), Positives = 259/413 (62%), Gaps = 11/413 (2%)

Query: 3   VMRSVLGMVVLLTIAFLLSVNKKKISLRTVGAALVLQVVIGGIMLWLPPGRWVAEKVAFG 62
           VM S+LGM  +L +A+L S N+K I+LRTV  AL+LQ+    ++L++P G+    +V   
Sbjct: 4   VMSSLLGMGAILLVAWLFSTNRKNINLRTVSLALLLQIFFALLVLYVPAGKEALNRVTGA 63

Query: 63  VHKVMAYSDAGSAFIFGSLVGPKMDTLFDGAGFIFGFRVLPAIIFVTALVSILYYIGVMG 122
           V +++ Y   G  F+FG L    +       GF+F   VL  IIF +AL+S LY++G+M 
Sbjct: 64  VSQLINYGQDGIGFVFGGLANGSV-------GFVFAINVLGIIIFFSALISGLYHLGIMP 116

Query: 123 ILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAIVKPFIDRLNRNELFTAICSGMA 182
            +I ++GG  QK L   + ES  A   IF+G  E P +VKP++ ++  ++ F  +  G+A
Sbjct: 117 KVINLIGGGLQKLLGTGRAESLSATANIFVGMIEAPLVVKPYLHKMTDSQFFAVMTGGLA 176

Query: 183 SIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFARLLSPATESSQVSFNNLSFTETPPK 242
           S+AG T++GYA+LGV + YL+AA+ M+ P G+L A+++ P TE    +            
Sbjct: 177 SVAGGTLVGYASLGVELNYLIAAAFMSAPAGLLMAKIMLPETEHVDAAIAQDELDLPKST 236

Query: 243 SIIEAAATGAMTGLKIAAGEATVVMAFVAIIALINGIIGGVGGWFGFAHASLESILGYLL 302
           +++EA A GAM+G+KIA      ++AFV++IAL+NG++G  GGWFG    S E I+GY+ 
Sbjct: 237 NVVEAIADGAMSGVKIAVAVGATLLAFVSVIALLNGLLGWFGGWFGI-ELSFELIMGYVF 295

Query: 303 APLAWVMGGDWSDANLAGSLIGQKLAINEFVAYLNFSPYLQTGGTLDAKTVAIISFALCG 362
           AP+AW++G  W +A  AGSLIG K+ +NEFVA++     ++    L A + AI++FALCG
Sbjct: 296 APVAWLIGIPWHEAITAGSLIGNKVVVNEFVAFIQL---IEVKEQLSAHSQAIVTFALCG 352

Query: 363 FANFGSIGVVVGAFSAVAPHRAPEIAQLGLRALAAATLSNLMSATIAGFFIGL 415
           FAN  ++ +++G   ++ P R   I+Q G RA+ A  L+NLMSA+IAG  + L
Sbjct: 353 FANISTMAILIGGLGSLVPERRSFISQYGFRAIGAGVLANLMSASIAGVILSL 405