Pairwise Alignments

Query, 533 a.a., methyl-accepting protein IV from Escherichia coli BL21

Subject, 617 a.a., chemotaxis protein from Burkholderia phytofirmans PsJN

 Score =  346 bits (887), Expect = 2e-99
 Identities = 222/508 (43%), Positives = 308/508 (60%), Gaps = 7/508 (1%)

Query: 5   IRISTTLFLILILCGILQIGSNGMSFWAFRDDLQRLNQVEQSNKQRA-ALAQTRAVMLQA 63
           IR S T+  I+++   + +G  G+S  A     Q L+++ + +     AL    A +L++
Sbjct: 7   IRTSLTIVGIILVALTVVVGVLGLS--ALNRASQSLDRIARGDLVAIHALDDASAYLLRS 64

Query: 64  STALNKAGTLTALSYPADDIKTLMTTARASLTQSTTLFKSFMAMTAGNEHVRGLQKETEK 123
             A+++  TL+A    AD+ K  +  A+  LT+    ++S++           L     K
Sbjct: 65  RLAVDRFNTLSAAGN-ADEAKKAIERAQELLTKGNQSWQSYLDAPKPGVDQALLDDVIAK 123

Query: 124 SFARWHNDLEHQATWLESNQLSDFLTAPVQGSQNAFDVNFEAWQLEINHVLEAA---SAQ 180
             +     ++ +   L +N ++ +           F     A    I  + ++A    A 
Sbjct: 124 RMSVMREGVDPEFAALNANDMAAYHAIADTKISPMFIAYDGAAAAVIKGLQQSAVDQQAS 183

Query: 181 SQRNYQISALVFISMIIVAAIYISSALWWTRKMIVQPLAIIGSHFDSIAAGNLARPIAVY 240
           +Q N  +   + I++  +A + +    +  R +IVQPLA   + F+ IAAG+L+  I V+
Sbjct: 184 AQSNISLMTTLIIAVTALALLLVVGIRFALRGLIVQPLADATACFERIAAGDLSETINVF 243

Query: 241 GRNEITAIFASLKTMQQALRGTVSDVRKGSQEMHIGIAEIVAGNNDLSSRTEQQAASLAQ 300
            RNEI  +FA +K MQ+++   V  V   ++ +  G  EI  GN DLS RTEQQAASL +
Sbjct: 244 SRNEIGRLFAGIKRMQESMSTMVKAVHSSTESIDTGAREIAMGNTDLSQRTEQQAASLQE 303

Query: 301 TAASMEQLTATVGQNADNARQASELAKNAATTAQAGGVQVSTMTHTMQEIATSSQKIGDI 360
           TA+SMEQLT TV QNA+NARQAS+LA NA+  A  GG  V  +  TMQ+IA+SS K+ DI
Sbjct: 304 TASSMEQLTGTVRQNAENARQASQLAVNASDIATRGGDVVGQVVTTMQDIASSSNKVVDI 363

Query: 361 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIKGLIEES 420
           I VI+GIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVR+LA RSA AAKEIK LI +S
Sbjct: 364 IGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSASAAKEIKELIGDS 423

Query: 421 VNRVQQGSKLVNNAAATMIDIVSSVTRVNDIIGEIASASEEQQRGIEQVAQAVSQMDQVT 480
           V++VQ GS LV  A  TM +IV +V RV DI+GEI++ASEEQ  GIEQV +AV QMD+VT
Sbjct: 424 VDKVQSGSALVGRAGTTMDEIVQAVRRVTDIMGEISAASEEQSGGIEQVNRAVVQMDEVT 483

Query: 481 QQNASLVEEAAVATEQLANQADHLSSRV 508
           QQNA+LVE+AA A   L +Q   L + V
Sbjct: 484 QQNAALVEQAAAAAASLEDQTRQLQAVV 511