Pairwise Alignments

Query, 375 a.a., ribonuclease D from Escherichia coli BL21

Subject, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

 Score =  340 bits (872), Expect = 4e-98
 Identities = 174/371 (46%), Positives = 249/371 (67%), Gaps = 1/371 (0%)

Query: 1   MNYQMITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGI 60
           +NYQ+I+    L  +C A R    + LDTEFVRTRT++PQLGLIQ+FDGE+L+LIDP  +
Sbjct: 9   VNYQIISQVGDLQRVCLAARDADVVMLDTEFVRTRTFFPQLGLIQMFDGENLSLIDPTVL 68

Query: 61  TDWSPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGRPMSWGFAS 120
            + +P   +L+D S+ K LHA  EDLEVF N FG  P P++DTQI+AAF G  +S GFA+
Sbjct: 69  DEMTPFVELLQDTSVLKVLHACGEDLEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGFAA 128

Query: 121 MVEEYSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAAL 180
           +V++   V LDKSESRTDWLARPL+++Q EYAAADV+YLLP+  KL+ +   +GW  AAL
Sbjct: 129 LVQDQLQVELDKSESRTDWLARPLSDKQLEYAAADVFYLLPMYEKLVEQVTQAGWWDAAL 188

Query: 181 DECRLMQMRRQEVVAPEDAWRDMTNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVR 240
            E  L   +R +V  PE A+ D+  AWQL+ ++LA L+ LA WR  +A  RDLA+NFV++
Sbjct: 189 QESELQVAKRTKVSNPELAYLDIKGAWQLKPKELAILKPLATWRYHEAVNRDLALNFVIK 248

Query: 241 EEHLWSVARYMPGSLGELDSLGLSGSEIRFHGKTLLALVEKAQTLPEEALPQPMLNLMDM 300
           E  L +++R    S   ++  G+    IR H   ++A+V+ A   P +A P  ++ +M+ 
Sbjct: 249 ETDLLTISRLALRSPKRMEEEGVDPHAIRRHSSKIIAMVKTALETPADAYPPEIVPIMEY 308

Query: 301 PGYRKAFKAIKSLITDVSETHKISAELLASRRQINQLLNWHWKL-KPQNNLPELISGWRG 359
           PGY++ FK +K  +  VS T  ++ E LAS++Q+NQLL+W WK  +    LP+L+ GWR 
Sbjct: 309 PGYKQLFKRLKDEVKSVSNTSGLATEFLASKKQLNQLLSWVWKRDRDPARLPDLMQGWRL 368

Query: 360 ELMAEALHNLL 370
            L+ E L+ L+
Sbjct: 369 PLLGEKLNTLV 379