Pairwise Alignments

Query, 340 a.a., autoinducer 2-binding protein from Escherichia coli BL21

Subject, 329 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  185 bits (470), Expect = 1e-51
 Identities = 105/308 (34%), Positives = 176/308 (57%), Gaps = 8/308 (2%)

Query: 7   KKIALLSVLGIAAISMNVQAA----ERIAFIPKLVGVGFFTSGGNGAQQAGKELG-VDVT 61
           K +  L V    A+++   AA    ++IA + K +G+GFF +   GAQ+A KELG V++ 
Sbjct: 2   KVLKSLMVTAAVAVALMANAAHAENKKIALVVKALGIGFFEAANKGAQEAAKELGDVEII 61

Query: 62  YDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKP 121
           Y GPT  +  GQ+++IN+ + Q  +AI VSA   D L PALK+AM RG++V++WDS    
Sbjct: 62  YTGPTSTTAEGQIEVINSLIAQKVDAIAVSANDTDALVPALKKAMDRGIKVISWDSGVAK 121

Query: 122 ECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKE 181
           E R  ++N  +   +G M++ +AA  +  +   VA   +S T T+QN W+ E K K+   
Sbjct: 122 EGRLMHLNPSSSPLIGNMIIKLAADNL-PEGGDVAVLSASATATNQNTWIAEMK-KVQGN 179

Query: 182 HPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENL-KNDKV 240
           + G  +V T +G + A KS +  +G+++++ +L AIIAP +  + AAAQA  +  K  ++
Sbjct: 180 YKGINVVATVYGDDLADKSYRETQGLIQSHPNLKAIIAPTSVGIVAAAQAVTDAGKIGQI 239

Query: 241 AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIQGVG 300
            + G   P+ M  +V+ G  K F +W+ +  G  +  +A  L+     K G +L +  +G
Sbjct: 240 NVTGLGLPSEMAGHVKSGASKSFAIWNPIDLGYSATMIAYDLINGAEAKPGAELKMGRMG 299

Query: 301 QVEVSPNS 308
            V++  N+
Sbjct: 300 TVKLDENN 307