Pairwise Alignments

Query, 340 a.a., autoinducer 2-binding protein from Escherichia coli BL21

Subject, 319 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25-INTG

 Score = 83.2 bits (204), Expect = 8e-21
 Identities = 76/287 (26%), Positives = 129/287 (44%), Gaps = 18/287 (6%)

Query: 18  AAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVD---VTYDGPTEPSVSGQV 74
           +A + +  A  ++  + K +   FF +  +GA+   K+   D   +T     E   S Q+
Sbjct: 26  SAFADDAAAKPKVGLVMKSLANEFFVTMQDGAKAYQKDHAADFDMITNGIKNETDTSAQI 85

Query: 75  QLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE-CRSYYIN---Q 130
            ++N  +    NAI+++      L   LK+A   G++V+  D+   P+  +S  +N    
Sbjct: 86  DIVNQMILSKVNAIVIAPADSKALVTVLKKASDAGIKVVNIDNRLDPDVLKSKNLNIPFV 145

Query: 131 GTPAQLGGMLV-DMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVT 189
           G   + G  LV D  A+Q+     KV      PT T+  Q  + A  K A +  G +IV+
Sbjct: 146 GPDNRKGSRLVGDYLAKQLASGD-KVGIIEGVPTTTNAQQ--RTAGFKDAMDAAGMKIVS 202

Query: 190 TQFGYNDATKSLQTAEGILKAYSDLDAIIAPDAN-ALPAAAQAAENLKNDKVAIVGFSTP 248
           TQ G  +  +  + A  +L  Y DL A++A + N AL A +      K  KV +VG+   
Sbjct: 203 TQSGNWEIDQGQKVASAMLSEYPDLKALLAGNDNMALGAVSAVRAAGKAGKVLVVGYDNI 262

Query: 249 NVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLD 295
             ++P ++ G V         QQ    +  A  L+K      G+K+D
Sbjct: 263 EAIKPMLQDGRVLATADQAAAQQAVFGIQNALKLVK------GEKVD 303