Pairwise Alignments

Query, 217 a.a., formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible from Escherichia coli BL21

Subject, 342 a.a., formate dehydrogenase, C subunit, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 74.3 bits (181), Expect = 3e-18
 Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 20/214 (9%)

Query: 5   KMIVRTKFIDRACHWTVVICFFLVALSGISFFF----------PTLQWLTQTFGTPQMGR 54
           KM+VR    D   HW + I   ++  +G++             P + W    +G+    +
Sbjct: 127 KMVVRWSKADLWIHWIMAISCLVLMFTGLTIMLGKHVVQELLGPDI-WAPLIYGS----K 181

Query: 55  ILHPFFGIAIFVALMFMFVRFVHHNIPDKKDIPWLLNIVEVLKGN--EHKVADVGKYNAG 112
            +H + G    V+ +   V+++        D+ W L +   +     + K  D G  NAG
Sbjct: 182 TVHDWAGPIFIVSWIVCVVKWMPLQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFANAG 241

Query: 113 QKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGIILIHAILIHMYM 172
           +KM FW++      + V+G+++  P      P +    +LLIH+ + +ILI   ++H++M
Sbjct: 242 EKMWFWTLTLFGLFISVSGIMLVLP--GLDLPREASMAALLIHSISAVILIAFTIVHIWM 299

Query: 173 AFWV-KGSIKGMIEGKVSRRWAKKHHPRWYREIE 205
           A  + +G ++ M  G     WA +HH  WY EI+
Sbjct: 300 ATVLSEGGMECMKSGYCDENWAIQHHNLWYDEIK 333