Pairwise Alignments

Query, 306 a.a., oligopeptide ABC transporter permease from Escherichia coli BL21

Subject, 336 a.a., peptide ABC transporter permease from Azospirillum brasilense Sp245

 Score =  199 bits (507), Expect = 6e-56
 Identities = 113/337 (33%), Positives = 189/337 (56%), Gaps = 34/337 (10%)

Query: 1   MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPF---TGERTLPPEVMANIEAKYHLND 57
           ML+FIL R    IPT   +  ++F ++RL PG P     GER +PPE +  +  +  L+ 
Sbjct: 1   MLRFILTRVSLVIPTFLGVTFLTFLLIRLVPGDPIEVRVGERGIPPERLLELRHELGLDR 60

Query: 58  PIMTQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGAAAFFLAVILGVSAGV 117
           P+  Q+  Y+  +  GD G S   ++   ++ V + FP + +L A A   A ++G+ AG+
Sbjct: 61  PLWHQFLDYIGGVLQGDLGVSLVTRNSVFSEFV-TLFPATLELAALAMLFATVVGLPAGI 119

Query: 118 IAALKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHWLPGGG------------ 165
           IAA+++ + +D+ VMG+++TG  +P F    LL++ F++ L W P  G            
Sbjct: 120 IAAVRRGSIFDHGVMGISLTGYSMPIFWWGLLLILFFSVGLGWTPVSGRLDLLYYVEPVT 179

Query: 166 ----------------WNGGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTA 209
                           W+  AL  +ILPM+ L    +A +AR+TR +M+EVL  ++IRTA
Sbjct: 180 GFMLIDTLMAGEYGAFWS--ALHHLILPMIVLGTVPLAVVARMTRSAMLEVLGEDYIRTA 237

Query: 210 RAKGLPMRRIILRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGALN 269
           +AKGL  +R+I  HAL+ AL+PV++ +G     ++ G+++ ETI+  PG+G+  +     
Sbjct: 238 KAKGLAGKRVIGLHALRNALIPVVTVIGLQVGTLLGGAILTETIFSWPGVGKWLIESINR 297

Query: 270 RDYSLVLSLTILVGALTILFNAIVDVLYAVIDPKIRY 306
           RDY  +    +L+    +  N +VDVLY V++P+IR+
Sbjct: 298 RDYPALQGGVLLIATTVMTVNLLVDVLYGVLNPRIRH 334