Pairwise Alignments

Query, 231 a.a., flagellar hook assembly protein from Escherichia coli BL21

Subject, 253 a.a., basal-body rod modification protein FlgD (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 92.8 bits (229), Expect = 5e-24
 Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 17/177 (9%)

Query: 10  PTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSG 69
           P+N+ V    S  LT       Q  F +LL  QL  QDP  P++N+++ +Q+A  STV G
Sbjct: 41  PSNSAVPEAKSQQLT-------QEDFFSLLSQQLSMQDPFKPVDNDQMIAQMASFSTVDG 93

Query: 70  IEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTT--ILAGTGSEEGAVTTTTPFGVE 127
           I KLN  + +++  + +SQ+LQAS L+G  V++P  T  I A +    G ++T+    V 
Sbjct: 94  ISKLNDQIVNLNSVMTSSQALQASGLVGRKVLLPTDTGYISAESPGLNGVISTSEKIPV- 152

Query: 128 LQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184
                  +   I D+ G VVRT  +     G     WDG    G     G+Y++  S
Sbjct: 153 -------INIRIEDEKGQVVRTFTVDGSKGGNTDVKWDGLNDKGEPVAAGNYSIKAS 202