Pairwise Alignments

Query, 231 a.a., flagellar hook assembly protein from Escherichia coli BL21

Subject, 144 a.a., Flagellar hook capping protein - N-terminal region from Sphingomonas koreensis DSMZ 15582

 Score = 57.0 bits (136), Expect = 2e-13
 Identities = 50/154 (32%), Positives = 71/154 (46%), Gaps = 20/154 (12%)

Query: 5   VTTTDPTNTGVSTTSSSSLTGSNAADLQ-SSFLTLLVAQLKNQDPTNPMENNELTSQLAQ 63
           V   DP     S  ++ + T  NA  L   + L +++ QL  QDP  PM+N E  SQLAQ
Sbjct: 3   VGAIDPQTQQPSANANQAAT--NAFGLSFDALLKIILTQLTYQDPLKPMDNFEFVSQLAQ 60

Query: 64  ISTVSGIEKLNTTLGS-ISGQIDNSQSLQASNLIGHGVMIPGTTILAGTGSEEGAVTTTT 122
            S +   + +N  L + +S Q  N    QA+ L+G  V +P     AG  +  G VT   
Sbjct: 61  FSQIQQAQTMNDRLEALVSAQATN----QATGLLGREVDVP-----AGNATLSGKVT--- 108

Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELT 156
              V  Q  A   T TI   +G  +  + IG +T
Sbjct: 109 --AVSFQNGAP--TVTIQTSDGRTLSGLAIGSIT 138