Pairwise Alignments

Query, 231 a.a., flagellar hook assembly protein from Escherichia coli BL21

Subject, 265 a.a., basal-body rod modification protein FlgD (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 77.4 bits (189), Expect = 2e-19
 Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 8/168 (4%)

Query: 21  SSLTGSNAADL-QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGS 79
           S++  S  ADL + +FL LLV QLK+QDP NPM++ E  +QLAQ +++  +  +NT + S
Sbjct: 18  SAVKKSGNADLGKDAFLQLLVTQLKHQDPLNPMDDKEFVAQLAQFTSLEQLMGINTGVTS 77

Query: 80  ISGQIDNSQSLQASNLIGHGVMIPGTTILAGTGSEEGAVTTTTPFGVELQQAADKVTATI 139
           ++      Q + A + IG  V+  G  I   +  ++G     +     + +   +    I
Sbjct: 78  MNEAFKQQQMMNAVSYIGKDVLASGDQI---SKIKDG----VSKLYFSIDEPITQGVINI 130

Query: 140 TDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN 187
            + +  +VR+  I    AG + + WDG    G+   +G Y VA++A N
Sbjct: 131 FNASNELVRSEFISAKQAGDYEYVWDGKDYQGNAMADGLYKVAMAAEN 178