Pairwise Alignments

Query, 151 a.a., curlin nucleator protein, minor subunit in curli complex from Escherichia coli BL21

Subject, 158 a.a., curlin from Rahnella sp. WP5

 Score = 65.1 bits (157), Expect = 5e-16
 Identities = 45/129 (34%), Positives = 62/129 (48%), Gaps = 12/129 (9%)

Query: 23  GYDLANSEYNFAVNELSKSSFNQAAIIGQAGTNNSAQLRQGGS-KLLAVVAQEGSSNRAK 81
           G D  N+  +  V   + + +N    I Q GT N A   Q G+ K L  ++Q+G  N A 
Sbjct: 29  GSDHGNNPPSSTVPTFTATQWNSEIQIYQQGTANLANATQSGAQKSLTAISQDGYRNSAG 88

Query: 82  IDQTGDYNLAYIDQAGSANDASISQGAYGNTAMIIQKGSGNKA-----------NITQYG 130
             QTGD +L  + Q G  N A++SQ A G+  ++ Q GSGN A           +ITQ G
Sbjct: 89  TTQTGDGSLISVVQKGEYNGANVSQSANGSKVLVSQNGSGNYAQASQGANGSLTSITQVG 148

Query: 131 TQKTAIVVQ 139
           T   A   Q
Sbjct: 149 TANLAYASQ 157



 Score = 35.8 bits (81), Expect = 3e-07
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)

Query: 77  SNRAKIDQTGDYNLAYIDQAGSAND-ASISQGAYGNTAMIIQKGSGNKANITQYGTQKTA 135
           ++  +I Q G  NLA   Q+G+     +ISQ  Y N+A   Q G G+  ++ Q G    A
Sbjct: 50  NSEIQIYQQGTANLANATQSGAQKSLTAISQDGYRNSAGTTQTGDGSLISVVQKGEYNGA 109

Query: 136 IVVQRQSQMAIRVTQ 150
            V Q  +   + V+Q
Sbjct: 110 NVSQSANGSKVLVSQ 124



 Score = 26.6 bits (57), Expect = 2e-04
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 109 YGNTAMIIQKGSGNKANITQYGTQKTAIVVQR 140
           + +   I Q+G+ N AN TQ G QK+   + +
Sbjct: 49  WNSEIQIYQQGTANLANATQSGAQKSLTAISQ 80