Pairwise Alignments

Query, 672 a.a., poly-beta-1,6-N-acetyl-D-glucosamine (PGA) N-deacetylase outer membrane export lipoprotein from Escherichia coli BL21

Subject, 349 a.a., polysaccharide deacetylase family protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 52.4 bits (124), Expect = 3e-11
 Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 40/243 (16%)

Query: 50  VAISWHNVEDEAADQRFMSVRTSALREQFAWLRENGYQPVSIAQ-IREAHRGGKPLPEKA 108
           V + +H+V + +   R  SV  +  R    +L +NG++ V +   + +  RG KP P +A
Sbjct: 20  VVLQYHHVSETSP--RVTSVTPAEFRSHMDFLAKNGFKVVPLTDLVAQIKRGEKP-PLRA 76

Query: 109 VVLTFDDGYQSFYTRVFPILQAFQWP-AVWAPVGSWVDTPADKQVKFGDELVDREYFATW 167
           V ++FDDGYQ+      PIL+ + +P  ++  +   V+         G + +  E  AT 
Sbjct: 77  VAISFDDGYQNIADNAVPILKEYGFPYTLFVSIAPMVE---------GHKGMMSE--ATL 125

Query: 168 QQVREVARSRLVELASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRERIR 227
           +Q+     S   E+A+H++                   +  +       E  + +  RI+
Sbjct: 126 KQL----ASEGAEIANHSY-------------------DHGHLVRRLEGEDESAWLLRIK 162

Query: 228 LDAVKM-TEYLRTKVEVNPHVFVWPYGEANGIAIEELKKLGYDMFFTLESGLANASQLDS 286
              ++     +R + E    +  +P+GE N        +LG   F      L   S L +
Sbjct: 163 TQLLQTEAALIRIRGETTQPMLAYPFGEYNAALQSLASELGMVAFGQQSGALGRYSALTA 222

Query: 287 IPR 289
           +PR
Sbjct: 223 LPR 225