Pairwise Alignments

Query, 672 a.a., poly-beta-1,6-N-acetyl-D-glucosamine (PGA) N-deacetylase outer membrane export lipoprotein from Escherichia coli BL21

Subject, 348 a.a., polysaccharide deacetylase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 78.6 bits (192), Expect = 4e-19
 Identities = 63/257 (24%), Positives = 116/257 (45%), Gaps = 35/257 (13%)

Query: 37  SLLAEQPWPHNGFVAISWHNVEDEAADQRFMSVRTSALREQFAWLRENGYQPVSIAQIRE 96
           +L+    +  N  V + +H+V          SV  +  REQ  +L ++G++ VS++Q+ E
Sbjct: 8   ALIGLMTFSANAVVILQYHHVSQTTPAAT--SVTPAQFREQMQFLADDGFKVVSLSQVVE 65

Query: 97  AHRGGKPLPEKAVVLTFDDGYQSFYTRVFPILQAFQWPAVWAPVGSWVDTPADKQVKFGD 156
           A +  + LP K V +TFDDGY+S  T   PIL+ F +P        +V     KQ KF +
Sbjct: 66  AIKNKQDLPAKTVAITFDDGYRSIATTAHPILKEFGFPYT-----LFVAIEPIKQ-KFTE 119

Query: 157 ELVDREYFATWQQVREVARSRLVELASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARY 216
            +       TW+++ ++++    ++A+H+W   + I+                       
Sbjct: 120 MM-------TWEELIQLSKEG-ADIANHSWAHEHLIR-------------------RLDN 152

Query: 217 ETAAEYRERIRLDAVKMTEYLRTKVEVNPHVFVWPYGEANGIAIEELKKLGYDMFFTLES 276
           E+  ++  RI+ + +     +R     N ++  +PYGE N    + L + G+  F     
Sbjct: 153 ESQIQWLPRIKANILATENAIREATGQNFNMLAYPYGEYNQAVQDMLTENGFVAFGQQSG 212

Query: 277 GLANASQLDSIPRVLIA 293
                S L ++PR  +A
Sbjct: 213 AAGPYSPLTALPRFPVA 229