Pairwise Alignments

Query, 716 a.a., ATP-dependent DNA helicase from Escherichia coli BL21

Subject, 690 a.a., ATP-dependent helicase DinG (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  350 bits (898), Expect = e-100
 Identities = 239/701 (34%), Positives = 372/701 (53%), Gaps = 38/701 (5%)

Query: 7   LKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLAGE---EGRHLAIEAPTGVGKTLS 63
           +K QI A YK +   +P+F PR  Q  M+A+++KTLAG+   + R + +EA TG+GK+LS
Sbjct: 6   VKNQIRAIYKDIAASLPNFRPRREQNFMVAEISKTLAGDYDKDRRIIVVEAGTGIGKSLS 65

Query: 64  YLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPL-LKKIIPDLKFTAAFGRGRYVCPR 122
           Y++  I +A   +K + ++TA VALQ+Q+  KDLP  L++   + +F    GR RYVC  
Sbjct: 66  YILGTIPLALASKKKVCIATATVALQEQLLHKDLPFFLEQSGLNFRFGLVKGRQRYVCLS 125

Query: 123 NLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLKGDLDTYKWDGLRDHTDIAIDDD 182
            L  L   + + Q  +     +  P+N +       L  D++  +W+G  D     I D 
Sbjct: 126 KLAMLIGDDNSTQMAMW----QTKPDNSQIAM-LQTLLNDVNEGRWNGEIDTLSTPIPDH 180

Query: 183 LWRRLSTDKASCLNRNCYYYRECPFFVARREIQEAEVVVANHALVMAAME--SEAVLPDP 240
           LW++++ DK SC +R    +R CPF  AR ++   +V++ANH+L+ A +E     +LP+P
Sbjct: 181 LWQQIACDKHSC-HRQLASHRNCPFHKAREDVDTWDVLIANHSLLFADLELGGGVILPNP 239

Query: 241 KNLLLVLDEGHHLPDVARDALEMSAEI--TAPWYRLQLDLFTKLVATCMEQFRPKTIPPL 298
           +++  V+DE HHLP VARD     A +   A W    L+   K  A    Q +   I  +
Sbjct: 240 EDVFYVIDEAHHLPIVARDFSSAQATLRGAADW----LEKVGKTSAKLQNQIKSNNI--I 293

Query: 299 AIPERLNAHCEELYELIASLNNILNLYMP-----AGQEAEHRFAMGELPDEVLEICQRLA 353
           A  + +  H   + +LI  LN + +         A  E+ +RF  G+LP  +    + LA
Sbjct: 294 APAQAMQDH---IGDLIGQLNQVAHYCDTQTKQFANPESRYRFEHGKLPGALKIPAENLA 350

Query: 354 KLTEMLRGLAELFLNDLSEKTGSHDIVRLHRLILQ--MNRALGMFEAQSKLWRLASLAQS 411
             + +           L+E     DI +     LQ  M   L   E   KLW++ +   S
Sbjct: 351 ATSNLALKQFNKMQLLLAEAIKDGDIPKHQAEALQAEMGFMLQRLENLQKLWKMMAKEDS 410

Query: 412 S-GAPVTKWATREEREGQLHLWFHCVGIRVSDQLERLLWRSIPHIIVTSATLRSLNSFSR 470
           + GAP+ +W      + Q+   F    I V   LE +LW+    +++ SATLR+LN+F  
Sbjct: 411 NKGAPMARWIELITGK-QVDYLFSASPIEVGFMLETMLWQKAAGVVLCSATLRALNNFDH 469

Query: 471 LQEMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMRVEPSIDNEEQHIAEMAAFFRKQVE 530
                GL  K G R++AL SPF++     + +P+M+ EP+   ++ + AE+A    + +E
Sbjct: 470 FAHQVGLSLKDGSRYLALQSPFDYPNNATLYLPKMKTEPT---DDAYTAELAEQILQLIE 526

Query: 531 SKKHLGMLVLFASGRAMQRFLDYVTD-LRLMLLVQGDQPRYRLVELHRKRVANGERSVLV 589
            +  +  LVLFAS   M++  + +   L L +L+QG+ PR +L+E H+ +   GE S+L 
Sbjct: 527 GE--MATLVLFASYWQMEKVAELLEGKLALEILIQGNAPRQQLLETHKAKCDKGEPSILF 584

Query: 590 GLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFN 649
           G  SF+EGLDL GD L+ + + K+ F    SPV     E++K     PF   ++P AS  
Sbjct: 585 GTGSFSEGLDLPGDYLTNLIVTKLPFAVPTSPVEQAHAEYVKIKGGNPFLQLTIPDASRK 644

Query: 650 LIQQVGRLIRSHGCWGEVVIYDKRLLTKNYGKRLLDALPVF 690
           LIQ  GRL+R    +G V I D+RL+TK YGK LLDALP F
Sbjct: 645 LIQSCGRLLRKEQDYGRVTILDRRLVTKRYGKSLLDALPPF 685