Pairwise Alignments

Query, 716 a.a., ATP-dependent DNA helicase from Escherichia coli BL21

Subject, 636 a.a., ATP-dependent DNA helicase from Escherichia coli Nissle 1917

 Score =  197 bits (500), Expect = 2e-54
 Identities = 198/701 (28%), Positives = 310/701 (44%), Gaps = 120/701 (17%)

Query: 18  LQEQIPDFIPRAPQRQMIADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQK 77
           L + IP F PR PQRQM   VA T A E+G+ L +EA TG GKT +YL P +      +K
Sbjct: 11  LAKAIPGFKPREPQRQMA--VAVTQAIEKGQPLVVEAGTGTGKTYAYLAPAL----RAKK 64

Query: 78  TLVVSTANVALQDQIYSKDLPLLKKIIPDLKFTAAF----GRGRYVCPRNLT--ALASTE 131
            +++ST + ALQDQ+YS+DLP + K    LK+T       GR  Y+C   L   ALA  +
Sbjct: 65  KVIISTGSKALQDQLYSRDLPTVSKA---LKYTGNVALLKGRSNYLCLERLEQQALAGGD 121

Query: 132 PTQQDLLAFLDDELTPNNQEEQKRCAKLKGDLDTYKWDGLRDHTDIAIDDDLWRRLSTDK 191
              Q     L D +   +   Q     + GD+ T           +A D   W  +++  
Sbjct: 122 LPVQ----ILSDVILLRSWSNQT----VDGDISTC--------VSVAEDSQAWPLVTSTN 165

Query: 192 ASCLNRNCYYYRECPFFVARREIQEAEVVVANHALVMAAM---ESEAVLPDPKNLLLVLD 248
            +CL  +C  Y++C    AR++  +A+VVV NH L +A M   ES      P+  +++ D
Sbjct: 166 DNCLGSDCPMYKDCFVVKARKKAMDADVVVVNHHLFLADMVVKESGFGELIPEADVMIFD 225

Query: 249 EGHHLPDVA----------RDALEMSAEITAPWYRLQLDLFTKL------VATCMEQFRP 292
           E H LPD+A          R  L+++ +IT   YR +L    +L      +A   + FR 
Sbjct: 226 EAHQLPDIASQYFGQSLSSRQLLDLAKDITIA-YRTELKDTQQLQKCADRLAQSAQDFRL 284

Query: 293 KTIPPLAIPERLNAHCEELYELIASLNNILNLYMPAGQEAEHRFAMGELPDEVLEICQRL 352
           +   P         +   L EL+A+             + +  F    L D+ LE+C  +
Sbjct: 285 QLGEP--------GYRGNLRELLAN------------PQIQRAFL---LLDDTLELCYDV 321

Query: 353 AKLTEMLRGLAELFLNDLSEKTGSHDIVRLHRLILQMNRALGMFEAQSKLWRLASLAQSS 412
           AKL+     L +           + +   L+R                   RL  L + +
Sbjct: 322 AKLSLGRSALLD----------AAFERATLYRT------------------RLKRLKEIN 353

Query: 413 GAPVTKWATREEREGQLHLWFHCVGIRVSDQLERLLWRSIPHIIVTSATLRSLNSFSRLQ 472
               + W     R    H       + V+D+ + L+ +     I TSATL   +      
Sbjct: 354 QPGYSYWYECTSR----HFTLALTPLSVADKFKELMAQKPGSWIFTSATLSVNDDLHHFT 409

Query: 473 EMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMRVEPSIDNEEQHIAEMAAFFRKQVESK 532
              G+++      + L SPF++  Q  + +PR   +    N+     ++AA  R  +E+ 
Sbjct: 410 SRLGIEQAES---LLLPSPFDYSRQALLCVPRNLPQ---TNQPGSARQLAAMLRPIIEAN 463

Query: 533 KHLGMLVLFASGRAMQRFL--DYVTDLRLMLLVQGDQPRYRLVELHRKRVANGERSVLVG 590
              G   +  +  AM R L   +   + L +L+QG+  + +L++    +  +   ++LV 
Sbjct: 464 N--GRCFMLCTSHAMMRDLAEQFRATMTLPVLLQGETSKGQLLQ----QFVSAGNALLVA 517

Query: 591 LQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNL 650
             SF EG+D++GD LS V I K+ F   D P++    E  +     PF+   LP A   L
Sbjct: 518 TSSFWEGVDVRGDTLSLVIIDKLPFTSPDDPLLKARMEDCRLRGGDPFDEVQLPDAVITL 577

Query: 651 IQQVGRLIRSHGCWGEVVIYDKRLLTKNYGKRLLDALPVFP 691
            Q VGRLIR     G +VI D RL+ + YG   L +LP  P
Sbjct: 578 KQGVGRLIRDADDRGVLVICDNRLVMRPYGATFLASLPPAP 618