Pairwise Alignments

Query, 368 a.a., putative ABC transporter permease from Escherichia coli BL21

Subject, 372 a.a., ABC transporter permease from Rhodanobacter denitrificans FW104-10B01

 Score =  293 bits (751), Expect = 4e-84
 Identities = 156/367 (42%), Positives = 232/367 (63%), Gaps = 4/367 (1%)

Query: 2   FHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLEVTNATIAIYDEDNGEHS 61
           F RL     KE+ S+LR+P++R ++ +P ++Q+++F FAATLEV N  IA+Y++D G  S
Sbjct: 8   FTRLRAQFVKEILSILRDPRSRMVVFVPPILQLLVFAFAATLEVRNVDIAVYNQDAGRWS 67

Query: 62  VELTQRFARASAFTHVLLLKSPQEIRPTIDTQKALLLVRFPADFSRKLDTFQTAPLQLIL 121
            EL QR   A   THV  + S +++   ID  + +  +  PADFSR +    +   Q+++
Sbjct: 68  HELVQRMDSARFITHVRHVDSQRQLHELIDRGQVIAALAIPADFSRTIAAGGSGRAQVLV 127

Query: 122 DGRNSNSAQIAANYLQQIVKNYQQELLEGKPKPNNSELVVRNWYNPNLDYKWFVVPSLIA 181
           DGR SNS QI   YL  I       ++ G    N   +VVR+W+NPNL Y+WF+VP L  
Sbjct: 128 DGRRSNSGQITVAYLSTIAAEVGAAVVPGTQASN--PVVVRHWFNPNLVYRWFIVPGLTG 185

Query: 182 MITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQIFIGKAVPALIVATFQATIVLAIG 241
           ++     +++TSLS+ARERE GT DQLLVSP +T +I I K++PAL + T     +++ G
Sbjct: 186 ILALFSALLITSLSIARERELGTFDQLLVSPTSTPEIIISKSLPALAIGTLLGLFMISAG 245

Query: 242 IWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISSLCSTQQQAFIGVFVFMMPAILLSGY 301
           ++ + IPF GS  L   ++V++ LS+VG GL+IS++ +TQQQA +G F   +PA+L+SG+
Sbjct: 246 VFLFGIPFTGSFGLLLASLVLFILSVVGIGLMISAVSATQQQAILGAFAIGVPAVLMSGF 305

Query: 302 VSPVENMPVWLQNLTWINPIRHFTDITKQIYLKD-ASLDIVWNSLWPLLVITATTGSAAY 360
            +PVENMPV LQ L    P+ HF  I +  +LK   +LDI+ N LWPL VI   T + A 
Sbjct: 306 ATPVENMPVALQWLAQAIPLTHFLVIVEGTFLKTMPALDILAN-LWPLAVIALVTLTLAT 364

Query: 361 AMFRRKV 367
           A+ R ++
Sbjct: 365 ALVRSRL 371