Pairwise Alignments

Query, 400 a.a., exonuclease, dsDNA, ATP-dependent from Escherichia coli BL21

Subject, 381 a.a., exonuclease SbcD from Cupriavidus basilensis FW507-4G11

 Score =  115 bits (287), Expect = 3e-30
 Identities = 101/394 (25%), Positives = 173/394 (43%), Gaps = 33/394 (8%)

Query: 1   MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60
           MR LHT+DWHLG+ F+++S   +    LD  +   +  + DA+++AGDV+D   PP  A 
Sbjct: 1   MRFLHTADWHLGRVFHARSLLEDQAWMLDQFVALVRERRPDAVLIAGDVYDRAVPPPEAV 60

Query: 61  TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119
            L +  +  +    G  +V++AGNHDS   L     ++      V          +   D
Sbjct: 61  ALLDDVLARIVADAGIPVVMIAGNHDSAQRLGFGARLLTAQGLHVAGITERDATCVTLSD 120

Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQ-QHYADACKLRGDQPLP 178
                 +  +P+  P  +    A    +   +  LAA  D  +  H A A          
Sbjct: 121 AHGEVRIYALPYAEPATV--RDAFDMEVPGHEAALAARLDAIRASHPAQARS-------- 170

Query: 179 IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYC 238
            +   H   +G   S++ R + +G   A  A  F   D +ALGH+HR Q  G  + + Y 
Sbjct: 171 -VVVAHAFVIGGEASESERPLSVGGSGAVAASVFDGFDLVALGHLHRPQTFG--QRIHYA 227

Query: 239 GSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ--LEQW 296
           GS +  S  E   +K V L+  +     S+E + +   + + +++G LA + AQ   +  
Sbjct: 228 GSLLKYSLSEVTHAKSVSLIELAADGAVSIEPIALTPRRDLRIVEGQLADLLAQGAADPR 287

Query: 297 RDVSQEPPVWLDIEITTDEYLHD-IQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355
           RD       ++   +T +  L D + R  QA   +L +E  ++ RS E      A    +
Sbjct: 288 RD------DYIHAVLTDNGALLDPMARLRQAYPNALAIERAVLARSGE------AGAAGQ 335

Query: 356 TLSELSVEEVFN---RRLALEELDESQQQRLQHL 386
            L +L   E+F    + +A E LD+ +++ L  +
Sbjct: 336 RLRQLDTGELFANFFKEVADEALDDDKRRVLDQV 369