Pairwise Alignments

Query, 303 a.a., nucleoid-associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function from Escherichia coli BL21

Subject, 306 a.a., recombination-associated protein RdgC from Pseudomonas fluorescens FW300-N2C3

 Score =  271 bits (694), Expect = 1e-77
 Identities = 141/300 (47%), Positives = 199/300 (66%), Gaps = 1/300 (0%)

Query: 2   LWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSHSDA-LTHVA 60
           +WFKNL++YRL++++   AE +E  LAS    PC SQ++   G+V P G   DA L HV+
Sbjct: 1   MWFKNLLIYRLTQDLPFDAEALETALASKLARPCASQELTTYGFVAPFGKGEDAPLVHVS 60

Query: 61  NGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAF 120
              ++I ARKEE+ILP  V++ AL+ K+ ++EAEQ RK+ K E+D LKDE++ + LPRAF
Sbjct: 61  QDFLLIAARKEERILPGSVVRDALKEKVEEIEAEQMRKVYKKERDQLKDEIIQAFLPRAF 120

Query: 121 SRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLSMENPIELTLTEWV 180
            R S T   I    GLI+V+ AS K+AED L+ LR+ +GSLPV PL+++     T+T+WV
Sbjct: 121 IRRSSTFAAIAPKQGLILVNSASPKRAEDLLSTLREVIGSLPVRPLTVKMAPTATMTDWV 180

Query: 181 RSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRI 240
           ++  AA  F +LDE EL+   EDGG++R K+QDLTS+EI  H+  GKVVT+L+L WQ ++
Sbjct: 181 KTQKAADDFFVLDECELRDTHEDGGIVRCKRQDLTSDEIQLHLNTGKVVTQLSLAWQDKL 240

Query: 241 QFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGE 300
            FV+ D   +KRLKF D L+DQ E    ++   + DA F LM       +  L+E LGGE
Sbjct: 241 SFVLDDKMVVKRLKFEDLLQDQAEQDGGDEALGQLDASFTLMMLTFGEFLPALVEALGGE 300