Pairwise Alignments

Query, 303 a.a., nucleoid-associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function from Escherichia coli BL21

Subject, 305 a.a., recombination-associated protein RdgC from Escherichia coli Nissle 1917

 Score =  416 bits (1069), Expect = e-121
 Identities = 202/301 (67%), Positives = 251/301 (83%)

Query: 3   WFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSHSDALTHVANG 62
           +FKN++VYR+SR+ ++  EE+E+QL    FTPCGSQDMAK GWV P+G  SD L H  N 
Sbjct: 5   FFKNMLVYRISRDFTINQEELEQQLELFRFTPCGSQDMAKTGWVSPLGQLSDRLHHTVNN 64

Query: 63  QIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAFSR 122
           Q+++  R+EEKILPSPVI + L  ++++LE++Q R+LKKTEKDSL+DEVLHSLLPRAFS+
Sbjct: 65  QVLLVIRREEKILPSPVITEELRKRVSRLESDQGRRLKKTEKDSLRDEVLHSLLPRAFSK 124

Query: 123 FSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLSMENPIELTLTEWVRS 182
            S   +WI+  +GLIMVD ASAK+AED+LALLRK+LGSLPVVPL+ME PIELT+T+WVRS
Sbjct: 125 NSTVGLWINVTDGLIMVDAASAKRAEDSLALLRKTLGSLPVVPLTMETPIELTMTDWVRS 184

Query: 183 GSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRIQF 242
           GSA  GF L DEAELK++LEDGG+ R KKQ L S+EI  H+EAGKVVTKL++DWQQRIQF
Sbjct: 185 GSAPAGFGLGDEAELKAILEDGGIGRFKKQTLVSDEIHVHLEAGKVVTKLSIDWQQRIQF 244

Query: 243 VMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGEAQ 302
           V+CDDGS+KRLKF +E+ +QN+DIDRED AQRFDADF+LMTGEL +LI  L   LGGEA+
Sbjct: 245 VLCDDGSIKRLKFSNEITEQNDDIDREDAAQRFDADFVLMTGELISLINGLTTSLGGEAK 304

Query: 303 R 303
           R
Sbjct: 305 R 305