Pairwise Alignments

Query, 299 a.a., transcriptional activator of cyn operon; autorepressor from Escherichia coli BL21

Subject, 309 a.a., transcriptional regulator, LysR family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  130 bits (327), Expect = 4e-35
 Identities = 89/273 (32%), Positives = 133/273 (48%), Gaps = 5/273 (1%)

Query: 4   RHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEV 63
           +H+ YF A+A  G F RAA A  +SQPALS QI++LE  LG PL +R  R IRLT  GE 
Sbjct: 7   KHLRYFDALARTGHFGRAAEASGISQPALSMQIKELEAMLGAPLVERRAREIRLTGLGED 66

Query: 64  WRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQ 123
            R  A + L E+G     +        G LRI V PT   YF+  ++     R P+I LQ
Sbjct: 67  LRLRARKILAEIGELDELVRSRDGPLVGRLRIGVIPTVAPYFLPQVIRALALRMPAIELQ 126

Query: 124 LQEMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIPLLTESLALVVAQHHPLAVHEQVAL 183
            +E   E +   L    LD  +   P+  P+L    L +E   LV A     A     + 
Sbjct: 127 PRETVTETLIAELLDSRLDAALVALPISEPDLREFALFSEDFVLVRAADE--ADQPVPSP 184

Query: 184 SRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLLPAA 243
            RL + +L+LL      R+Q   +C+ +   P+ ++E +S+S +++++      TL+P  
Sbjct: 185 ERLKEMRLLLLEEGHCFRDQALSFCDISVGEPRYMMEGSSLSTLVQMVGAGMGLTLIPEM 244

Query: 244 IATQHDGLKAISLA---PPLLERTAVLLRRKNS 273
                     +S+A   PP   RT  ++ RK +
Sbjct: 245 AVPLDTARAEVSVARFEPPAPSRTIGMVWRKTN 277