Pairwise Alignments

Query, 283 a.a., putative DNA-binding transcriptional regulator from Escherichia coli BL21

Subject, 287 a.a., MDR efflux pump AcrAB transcriptional activator RobA from Rahnella sp. WP5

 Score =  146 bits (369), Expect = 4e-40
 Identities = 90/284 (31%), Positives = 144/284 (50%), Gaps = 11/284 (3%)

Query: 6   ILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAIL 65
           I++ LL W+E +L+ P+S++++A K+GYS+ ++Q +F++  +  +G YIR RRL +AA+ 
Sbjct: 6   IIRDLLSWLETHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTNNAIGAYIRARRLSKAAVA 65

Query: 66  VRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQK 125
           +RLT++ +LDIAL   FDSQQ+F+R FKK F  +P  YR  + W    I P   +     
Sbjct: 66  LRLTSRPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRAEDWHSFGICPPIRLGAFIL 125

Query: 126 TECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKT---DIYFVSTF 182
            +   ++ PE  + G +  Y   +   +     ++RRH   + +   KT    +Y +   
Sbjct: 126 PQPEYVSLPEQHLIGMTQSYSCTLEQITTYRN-EMRRHFWRQYIGEAKTLPPILYGLHHS 184

Query: 183 EPSTKSVDLLTVETFAGTVCEYADMPKE-----WTTTRGLYASFRYEGNWENYPDWVRNI 237
            PS +  D    E    T  E   +P+           G YA F Y G  E   +++  +
Sbjct: 185 RPSQEKDD--EQEVLYTTALEAQHLPENVEGQPIVLQHGEYAMFHYNGTPERLQEFILTL 242

Query: 238 YLIELPARGLARVNGSDIERFYYNEDFVEKDGNDVVCEIFIPVR 281
           Y   LP   L R  G DIERFY N         ++ C+  IP+R
Sbjct: 243 YSTCLPTLKLTRRKGQDIERFYTNGHAPGTAPTEIQCDYLIPIR 286