Pairwise Alignments

Query, 283 a.a., putative DNA-binding transcriptional regulator from Escherichia coli BL21

Subject, 285 a.a., helix-turn-helix domain-containing protein from Escherichia coli Nissle 1917

 Score =  544 bits (1402), Expect = e-160
 Identities = 262/285 (91%), Positives = 272/285 (95%), Gaps = 2/285 (0%)

Query: 1   MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 60
           MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC
Sbjct: 1   MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 60

Query: 61  RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 120
           RAAILVRL+AKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI
Sbjct: 61  RAAILVRLSAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI 120

Query: 121 RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVS 180
           RQQQKTECRL+NFPETPIFGNSFKYDIEVSNK PDEEVKLRRHHL RCMKNFKTDIYFVS
Sbjct: 121 RQQQKTECRLVNFPETPIFGNSFKYDIEVSNKLPDEEVKLRRHHLVRCMKNFKTDIYFVS 180

Query: 181 TFEPSTKSVDLLTVETFAGTVCEYAD--MPKEWTTTRGLYASFRYEGNWENYPDWVRNIY 238
           TFEPSTKSVDLLTVETFAGTVC+  D  MPKEWT  RGLY SFRYEG WE+YP+W RN+Y
Sbjct: 181 TFEPSTKSVDLLTVETFAGTVCKQTDSEMPKEWTINRGLYVSFRYEGEWEHYPEWARNLY 240

Query: 239 LIELPARGLARVNGSDIERFYYNEDFVEKDGNDVVCEIFIPVRPV 283
           L+ELPARGLARVNGSDIERFYYNE+FVE D N++VCEIFIPVRPV
Sbjct: 241 LMELPARGLARVNGSDIERFYYNENFVEIDSNNIVCEIFIPVRPV 285