Pairwise Alignments

Query, 378 a.a., putative transposase from Escherichia coli BL21

Subject, 330 a.a., transposase from Sinorhizobium meliloti 1021

 Score =  132 bits (333), Expect = 1e-35
 Identities = 98/319 (30%), Positives = 154/319 (48%), Gaps = 19/319 (5%)

Query: 57  FLKQYGDFENGIPVHDTIARVVSCISPSKFHECFINWMRDCHTSDDKDVIAIDGKTLRHS 116
           +LK       GIP HDT + V   + P  F   F   +        + V+AIDGK +R +
Sbjct: 26  WLKTIVPLPYGIPSHDTFSTVFRHLDPDAFDAAFRR-LTASFAQGLEGVVAIDGKAVRGA 84

Query: 117 YDKSRRKGAIHVISAFSTMHSLVIGQIRTDEKSNEITAIPELLNMLDIKGKIITTDAMGC 176
           Y ++ +   +H ++ ++    LVIGQ +     NE+    + L +L ++G I+T DA+ C
Sbjct: 85  YRRAAKATPLHFVNVWAAGPGLVIGQ-KLAPGRNEVQGALDALALLALEGSIVTADALHC 143

Query: 177 QKDIAEKIQKQGGDYLFAVKGNQ-GRLNKAFEEKFPLKELNNPEHDSYAISEKSHGREEI 235
           + D A  I   GGDY  A+K NQ G L +A      +++  + E    A +E +H R E 
Sbjct: 144 RPDTARAILAAGGDYALALKANQPGLLAQALAR---IEDAGHVESIQIA-AETAHDRIET 199

Query: 236 RLHIVCDVPDELIDFTFEWKGLKKL-CVAVSFRSIIAEQKKETEMTVRYYISSADLTAEK 294
           R   V    D        + GL+ + CV  + R             VRY++ S  ++   
Sbjct: 200 RRASVVAAGD------INFPGLQAIGCVETTSRHTNGHLTSH----VRYFLLSTTMSPSA 249

Query: 295 FATAIRNHWHVENKLHRRLDVVMNEDDYKIRRGNAAELFSGIRHIAINILTNEKVFKAGL 354
               +R HW +EN LH  LDV   ED  + R+ N  +  + +R IA+N L +    KA +
Sbjct: 250 LIEVVRTHWQIENNLHWVLDVHFREDAARNRKDNGPQNIAFLRKIALNHLRSHP-DKASI 308

Query: 355 RRKMRKAAMDRNYLASVLA 373
           RRK++KA  D  +L S++A
Sbjct: 309 RRKIKKAGWDDEFLTSLIA 327