Pairwise Alignments

Query, 783 a.a., DNA polymerase II from Escherichia coli BL21

Subject, 795 a.a., DNA polymerase II (EC 2.7.7.7) from Pseudomonas fluorescens FW300-N1B4

 Score = 1079 bits (2790), Expect = 0.0
 Identities = 533/784 (67%), Positives = 624/784 (79%), Gaps = 4/784 (0%)

Query: 3   QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
           Q GF+LTRHWRDTP GTEV FWLATD GP +V L  Q SVAFIPA Q  +A+ +L GE+ 
Sbjct: 13  QQGFVLTRHWRDTPAGTEVEFWLATDAGPRRVRLPHQPSVAFIPAAQREQAEGMLHGEKN 72

Query: 63  VRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
           V L PLAL DF  +PV GLYC+ H QLM  E  LR   V V+EADVRPPERY+MERFIT+
Sbjct: 73  VELKPLALLDFEHRPVLGLYCQQHGQLMRLETALRRSSVDVFEADVRPPERYMMERFITA 132

Query: 123 PVWVEGDMH-NGAIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
           PV   G     G +++A++KP P YRP L+ VS+DIETT  GELY I LEGCG+R VYML
Sbjct: 133 PVLFGGTPSAEGLLLDAQMKPDPGYRPNLRLVSLDIETTAQGELYSIALEGCGERQVYML 192

Query: 182 GPENGDASALDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241
           GP NGD   +DF+LEY  SR  LL+KLN WFA +DPD IIGWNVVQFDLR+L +HA R  
Sbjct: 193 GPPNGDDRGVDFQLEYCDSRTLLLKKLNEWFARHDPDAIIGWNVVQFDLRVLHEHARRLA 252

Query: 242 IPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301
           +PL+LGR   E+ WREHG  N  +FA A GRLIIDGIE+L+SA W+F SFSLE VAQ LL
Sbjct: 253 VPLKLGRGGEEMHWREHGSGNH-YFASAAGRLIIDGIESLRSATWSFPSFSLENVAQTLL 311

Query: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361
           GEGKSIDNP+ RMDEI+R FAEDKPALA YNLKDCELVT+IF KTE++ FLLERA+V GL
Sbjct: 312 GEGKSIDNPYQRMDEINRMFAEDKPALAKYNLKDCELVTRIFAKTELLTFLLERASVTGL 371

Query: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421
           P DR GGSVAAF HLY P MHR G+VAPNLG  PP ASPGG+VMDS+PGLY+SVLVLDYK
Sbjct: 372 PADRSGGSVAAFTHLYMPLMHRQGFVAPNLGGKPPQASPGGFVMDSQPGLYESVLVLDYK 431

Query: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481
           SLYPSIIRTFLIDPVGL+EG+  PD   S  GF  A FSR +HCLP IV  +  GR+ AK
Sbjct: 432 SLYPSIIRTFLIDPVGLIEGLKHPDDSESVPGFRGARFSRTRHCLPAIVARVAEGRETAK 491

Query: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541
           R+ N PLSQALKIIMNAFYGVLG++ CRFFD RLASSIT+RGH+IM +T+ LIEAQG+ V
Sbjct: 492 REHNVPLSQALKIIMNAFYGVLGSSGCRFFDTRLASSITLRGHEIMLRTRQLIEAQGHAV 551

Query: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETL-QKQRLTSALELEYETHFCR 600
           IYGDTDSTFVWL+ AH + EAA+IG ALV HVN WW E + Q+  L SALEL++ETH+ R
Sbjct: 552 IYGDTDSTFVWLRRAHGQAEAAQIGHALVDHVNQWWREHVKQEYGLESALELQFETHYKR 611

Query: 601 FLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRN 659
           FLMPTIRGA+ GSKKRYAGL+   D    MV+KGLETVRTDW+PLA+QFQQELYLRIF  
Sbjct: 612 FLMPTIRGAEEGSKKRYAGLVTRADGTDEMVYKGLETVRTDWSPLARQFQQELYLRIFNR 671

Query: 660 EPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRP 719
           +PYQ+YVR+ + K +AGE D RL+YRKRLRR L +YQRNVPPHVRAAR+AD+ N ++GRP
Sbjct: 672 KPYQDYVRDYVRKTLAGEFDERLIYRKRLRRTLDDYQRNVPPHVRAARIADDYNDQQGRP 731

Query: 720 LQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQ 779
            QYQN G I YV T  GPEPL+ + +P+DY+HY+TRQLQPVA+ ILPF++D+F+TL+ GQ
Sbjct: 732 RQYQNGGWISYVITVAGPEPLEIRSAPIDYDHYVTRQLQPVADAILPFVDDDFSTLIGGQ 791

Query: 780 LGLF 783
           LGLF
Sbjct: 792 LGLF 795