Pairwise Alignments

Query, 507 a.a., DNA-binding protein from Burkholderia phytofirmans PsJN

Subject, 444 a.a., DNA-binding transcriptional regulator from Escherichia coli ECRC99

 Score =  249 bits (636), Expect = 1e-70
 Identities = 163/454 (35%), Positives = 240/454 (52%), Gaps = 25/454 (5%)

Query: 25  PLQKQLLERLQQAILAGRLPAGSLLPSSRLLAAEMGVSRNTVVIAYEHLAAVGYVVA-DK 83
           P  + +  +L+  I  G+L  G+ LPSSR  + E+GVSR+TV  AY  L A G++V   +
Sbjct: 2   PRYQDIARQLKTVIEQGKLKPGARLPSSRTWSQELGVSRSTVENAYAELVAQGWLVRRGQ 61

Query: 84  KGTRVSPLSSPSARGEPPSQPAAPDVAYASRVGQFAATRTHADNTFPLTPGTPALDRFPL 143
            GT VS    P        Q A   VA+A    Q            P   G PALD FP 
Sbjct: 62  AGTFVSEQIHPQ-------QSAVDVVAFAGESQQ----------PLPFQMGLPALDLFPR 104

Query: 144 TAWRRALERSMERASPLALGYGTPAGEPALRDAIAAHLRMARGVRCEGSQVVITEGAQEA 203
             W R + R +   +   L  G   GE ALR+AI  +LR++RG+ C+  QV IT G   +
Sbjct: 105 ELWARVMGRRLRTQTRFDLALGDVCGEAALREAIVDYLRVSRGIDCQPEQVFITHGYAAS 164

Query: 204 LNLCVRLFSNPGDVAWVEDPGYRGAKAAFNLGDLATLPIPVDAEGMAVPSDAWRTQPPKL 263
           + L +   + PGD  W+EDPG+   +       +  LP+PVD  G+ V S        + 
Sbjct: 165 MALILHALAQPGDGMWMEDPGFPLIRPIVTRHGVEILPVPVDDNGLDVTSGIQNYPDARF 224

Query: 264 IYTSPAHQYPTGSVLSVARRLELIAQARRSGAWLIEDDYDGEFRHTGEPIASMQGLVEDA 323
              +PAHQ P G  LS+ARR +++  A RS AW+IEDDYD EFR+ G+P+ +++ L    
Sbjct: 225 ALITPAHQSPLGVALSLARRYQILEWAERSQAWIIEDDYDSEFRYHGKPLPALKSLDAPQ 284

Query: 324 PVLYVGSFSKTMFPALRIGFVVLP-QPIAAHTAIAVQEMLRGGHRLEQLALAHFIESGEF 382
            V+Y G+FSK +FPALR  ++V+P + I+     A  E       L Q  LA FI  G F
Sbjct: 285 RVIYAGTFSKALFPALRCAWLVVPVEQISQFRQQASLEPC-AVPVLWQNTLADFIREGHF 343

Query: 383 GRHLGRMRRLYRERQQALRDALTEHFAPSQILGGNCGMHLTLRLPPRIDDRTLAERALAQ 442
            RHL +MR+ Y +R+Q +  ALT+     Q++    G+ + ++L    +D T   +A A 
Sbjct: 344 WRHLKKMRQHYAQRRQWIEQALTQQ--GFQVVPQKGGIQMVIKLAG--NDVTFVHKANAA 399

Query: 443 GLNPRALSGFALQPRAETNGLVIGYGNTPAERLA 476
           GL  +ALS + ++  +E  GL++ + N  +E +A
Sbjct: 400 GLAVQALSDWRIR-SSEDGGLLLSFTNIVSESMA 432