Pairwise Alignments

Query, 579 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

Subject, 1246 a.a., Photosystem I assembly protein Ycf3 from Azospirillum sp. SherDot2

 Score =  100 bits (249), Expect = 4e-25
 Identities = 105/377 (27%), Positives = 161/377 (42%), Gaps = 36/377 (9%)

Query: 221 LRLYPYRLQTYFHINLELVRRGLHDRLEDLWDESVRRLPNERLPRLFNALMVIALGKLTE 280
           LRL P   +T  ++ L    +G  D  E L+ +++   P   L R   AL ++  G+L +
Sbjct: 210 LRLAPGDAETMVNLALLREAQGRGDEAEALYAQALIHAPGFALARWNLALRLLGRGRLAD 269

Query: 281 GFRRREALFDGADWRGRTTVAPPAYAKWCGESLKGKSIVIWSEFGLGDEIFFFRFARIYR 340
           G+   EA F         + + PA+++W  +   G+ +++W E GLGDE+ F        
Sbjct: 270 GWEEYEARFASRRVSAGRSFSLPAFSEWTWDGAPGRRLLVWREQGLGDELMFGTALPDLA 329

Query: 341 ERHGAARVTVVCQAPLVELF-RASGEATAICPVEDAPQLPCHDYWVYPHAIPVWASLDID 399
           ER G   + V   A L  L  RA   AT      D    P       P      A L + 
Sbjct: 330 ERFGPEMLVVEVDARLTGLVGRALPGATVRAQTADPAPAPAPA--PAPAPADADAHLPMG 387

Query: 400 HLPQVVPYLRADVEHTPMVLPGN--------------AQALKVGVIFKGAPTHENDAARS 445
            LPQ++    AD    P  L  +                 L+VG+ + G+     +   S
Sbjct: 388 SLPQLLRSGLADFPARPSWLAPDPLRLAEWRDRLAALGPGLRVGLCW-GSQNMLGERKAS 446

Query: 446 LPSLSCLDPLFALDDVEFYIMQKGQGEEEAADYAVRSRNVHDLGPRLRSFGDT------- 498
             +L+   PL  L  +    +Q    E E A  AV ++    LG R+R +  T       
Sbjct: 447 YTTLAGWAPLLTLPGLIPVTLQYDGREAEIA--AVEAQ----LGLRIRRWPGTDLKNDLE 500

Query: 499 --AKVMNALDLIISVDTSAANLAGAMGRPLWLMLPMLGDWRWHLEREDSPWFPSARLFRE 556
             A ++  LDL+++V +S   +AGA+G P+W   P  GDW   L     PWFPS RL+  
Sbjct: 501 GVAALIAGLDLVVTVASSVGEMAGALGVPVWRFGP-AGDWT-ALGTGVRPWFPSMRLWSA 558

Query: 557 K-GRGWSEVVERIRLAL 572
           + G G  +V+ R+   L
Sbjct: 559 RPGEGLPDVLARMAAEL 575



 Score = 97.8 bits (242), Expect = 2e-24
 Identities = 103/342 (30%), Positives = 143/342 (41%), Gaps = 19/342 (5%)

Query: 221  LRLYPYRLQTYFHINLELVRRGLHDRLEDLWDESVRRLPNERLPRLFNALMVIALGKLTE 280
            L L P R +  ++    L   G     +  + ++V   P   L         +A G L  
Sbjct: 887  LALEPGRAEWRYNQGNALHAAGRPVEADAAYRQAVEDDPALTLAAFNRGYAALAQGDLAA 946

Query: 281  GFRRREALFDGADWRGRTTVAPPAYAKWCGESLKGKSIVIWSEFGLGDEIFFFRFAR--I 338
            G+   EA F             PA   W G  L GK++++W E G+GDE+         I
Sbjct: 947  GWTGLEARFAAGQALPDRRFRMPA---WEGGELTGKTLLVWREQGVGDELMHSACYPDLI 1003

Query: 339  YRERHGAARVTVVCQAPLVELF-RASGEATAICPVEDAPQLPCHDYWVYPHAIPVWASLD 397
             R   GA RV V C+  L  LF R+  +AT     ED     CH   V   ++P+     
Sbjct: 1004 ARTLSGAGRVIVECEPRLAALFARSFPQATVRAATEDPADADCH---VPAGSLPLQLGWG 1060

Query: 398  IDHLPQVVPYLRAD---VEHTPMVLPGNAQALKVGVIFKGAPTHENDAARSLPSLSCLDP 454
            ++       +LRAD   VE     L G   AL VG+ ++         A   P L+   P
Sbjct: 1061 LESFATQGGWLRADEAAVERWRGWLGGTGSALTVGLCWRSGLRGALRDANYAP-LTDWAP 1119

Query: 455  LFALDDVEFYIMQKGQGEEEAADYAVRSRNVHDLGPRLRSFGD---TAKVMNALDLIISV 511
            +  L  +    +Q  + E E AD A R   +    P L    D    A +  ALDL+IS 
Sbjct: 1120 ILTLPGLRLITLQYDECEAELAD-AERRFGIAIHRPPLDLKNDLDGAAALTAALDLVISA 1178

Query: 512  DTSAANLAGAMGRPLWLMLPMLGDWRWHLEREDSPWFPSARL 553
             TS A +AGA+G P+W + P  GDW   L     PW+PS RL
Sbjct: 1179 GTSVAEMAGALGVPVWRIGP-AGDWT-ALGTGCRPWYPSMRL 1218