Pairwise Alignments

Query, 340 a.a., ABC transporter from Burkholderia phytofirmans PsJN

Subject, 229 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  172 bits (437), Expect = 6e-48
 Identities = 94/218 (43%), Positives = 134/218 (61%), Gaps = 5/218 (2%)

Query: 6   AALALVATGLISGCATGPDRKPGDPFEPMNRVVFNFNDGLDRYVAVPVAKGYQKVTPQPL 65
           A L++ AT L++  A     +  DP+E +NR +F FND +D Y   P+A+GYQ VTPQ +
Sbjct: 8   AQLSVCATVLLAPFAAQAASED-DPWESVNRPIFTFNDTVDTYALKPLAQGYQFVTPQFV 66

Query: 66  RTAVSNFFSNLGDLSNAANALLQLKITDATEDIVRFAFNSTFGLGGLLDWATPAGLPKHH 125
           +  + NFF N+GD+ N AN +LQLK  +A  D  R   N+TFG+ G +D  T  GL +  
Sbjct: 67  QDGIHNFFRNIGDVGNLANNVLQLKPHNAGVDTARLLVNTTFGVLGFIDVGTKMGLQRSD 126

Query: 126 QDFGLTLGHWGIPSGPYLVLPLFGPSTVRDSMGLIVDVKFNPLNYM-EPAVRNPLYLLQF 184
           +DFG TLG+WG+ SGPY++LPL GPST+RD+    VD    P  YM +   RN  + L  
Sbjct: 127 EDFGQTLGYWGVGSGPYVMLPLLGPSTLRDAPSKYVDSYTQPYRYMNDIGWRNSTFGLNI 186

Query: 185 VSVRSDLLGASDLLQQAALDKYSFVRDAYTQQRRARLR 222
           V  R+ LL +  L+     DKY+F+R+AY Q R  +++
Sbjct: 187 VDTRASLLDSEKLITG---DKYTFIRNAYLQNREFKVK 221