Pairwise Alignments

Query, 340 a.a., ABC transporter from Burkholderia phytofirmans PsJN

Subject, 248 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  158 bits (399), Expect = 2e-43
 Identities = 87/198 (43%), Positives = 121/198 (61%), Gaps = 7/198 (3%)

Query: 29  DPFEPMNRVVFNFNDGLDRYVAVPVAKGYQKVTPQPLRTAVSNFFSNLGDLSNAANALLQ 88
           DP E +NR +++FN  LD++V +P+  GYQ VTP  +RT VSNFF+NLGD+ N  N++LQ
Sbjct: 51  DPLESINRRIYHFNYRLDQWVLLPLVNGYQYVTPSFVRTGVSNFFNNLGDVPNLFNSVLQ 110

Query: 89  LKITDATEDIVRFAFNSTFGLGGLLDWATPAGLPKHHQDFGLTLGHWGIPSGPYLVLPLF 148
           LK   + E   R  FN+  G+GGL D AT  GLP+  +DFG TLG +G+P GPYL+LP+ 
Sbjct: 111 LKAKRSAEITARLMFNTIIGVGGLWDPATSMGLPRQSEDFGQTLGFYGVPDGPYLMLPVL 170

Query: 149 GPSTVRDSMGLIVDV----KFNPLNYMEPAVRNP-LYLLQFVSVRSDLLGASDLLQQAAL 203
           GPS +RD+ GL+VD       N LN  E +  +P ++ L+ V  R         L     
Sbjct: 171 GPSNLRDTTGLVVDYAGEQAVNYLNVAEASTDHPEIFALRVVDKRYTTKFRYGQLNSPF- 229

Query: 204 DKYSFVRDAYTQQRRARL 221
            +Y  VR  YTQ R+ ++
Sbjct: 230 -EYEKVRYVYTQARKLQI 246