Pairwise Alignments

Query, 340 a.a., ABC transporter from Burkholderia phytofirmans PsJN

Subject, 246 a.a., Nucleoside ABC transporter, periplasmic nucleoside-binding protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  233 bits (593), Expect = 5e-66
 Identities = 119/219 (54%), Positives = 154/219 (70%), Gaps = 2/219 (0%)

Query: 4   RNAALALVATGLISGCATGPDRKPGDPFEPMNRVVFNFNDGLDRYVAVPVAKGYQKVTPQ 63
           + AALAL  + L++GCATGPD  P DP EP NR V+ FND +D  V  PVA  YQKVTP 
Sbjct: 14  KGAALALTVS-LMAGCATGPDANPRDPLEPFNRGVYQFNDAVDTAVLKPVATAYQKVTPS 72

Query: 64  PLRTAVSNFFSNLGDLSNAANALLQLKITDATEDIVRFAFNSTFGLGGLLDWATPAGLPK 123
           P+RT VSNFFSNLGDL ++ NA LQL+  +ATE+++RF+ N+ FG+ G+LD A+  G+P+
Sbjct: 73  PVRTGVSNFFSNLGDLWSSVNAGLQLRPREATENLMRFSVNTVFGIAGVLDIASEMGIPR 132

Query: 124 HHQDFGLTLGHWGIPSGPYLVLPLFGPSTVRDSMGLIVDVKFNPLNYMEPA-VRNPLYLL 182
              DFG T+G WG PSGPYLVLPL GPS+VRD  GL+VD   +P++ +     RN L  L
Sbjct: 133 TRLDFGQTMGRWGAPSGPYLVLPLLGPSSVRDGTGLVVDFVGDPVSSVNHVPSRNSLMAL 192

Query: 183 QFVSVRSDLLGASDLLQQAALDKYSFVRDAYTQQRRARL 221
           + V  R+ LL A  LL  AALDKYSF+RD Y  +R+ ++
Sbjct: 193 RVVDTRAGLLRAGTLLDDAALDKYSFMRDFYLNRRQNQI 231