Pairwise Alignments

Query, 469 a.a., multidrug transporter from Burkholderia phytofirmans PsJN

Subject, 486 a.a., RND efflux system, outer membrane lipoprotein CmeC from Pseudomonas fluorescens GW456-L13

 Score =  454 bits (1168), Expect = e-132
 Identities = 242/477 (50%), Positives = 327/477 (68%), Gaps = 25/477 (5%)

Query: 1   MAFALAVLAGCTLDPHYERPAAPVAVAYPQGDAYESTSTAAATVAKSASATVVVPPLAVD 60
           +A A  VL GC+L P Y++P APVA  YPQG AY      A   A+              
Sbjct: 8   LAVAAFVLGGCSLIPDYQQPEAPVAGQYPQGPAYSPAQAPAQAAAEQG------------ 55

Query: 61  TAWRSFFRDERLQRLIEIALANNRDLRVAALNVAEYEAQYRITRAALAPSISASGSLTRE 120
             W+ FF D  LQ+LI++AL NNRDLRVAALN+  + AQYRI+RA L P++SA+GS +R+
Sbjct: 56  --WKQFFHDPALQQLIQVALENNRDLRVAALNIDAFAAQYRISRADLFPAVSANGSGSRQ 113

Query: 121 RTQ---------GVTSSVSDLNVGTTSWEIDFFGRLRSLKRQALENYLATDASRQSTQIS 171
           R           G++SS S   VG +++E+D FGR+RSL  +AL+ Y AT+  R+STQIS
Sbjct: 114 RLPADASQTGEAGISSSYS-ATVGVSAYELDLFGRVRSLNEEALQKYFATEEGRRSTQIS 172

Query: 172 LIATVATDYLTLLSDERLLQLTEDTVKADQSTYDVTKRVQELGNSSLLDVQQAENSLASA 231
           L+A+VA  YLT  +D+ L +LT+DT+ A + +Y +T R  E+G +S LD+ Q+  S+ +A
Sbjct: 173 LVASVANAYLTWQADKELYKLTQDTLAAFEESYKLTARSNEVGVASALDLAQSRTSVENA 232

Query: 232 KASLASYRRAVAQDRNNLIAILGAPIPDDLPPARSFDDESMFADIGAGVPSLLLTRRPDI 291
           +A LA Y R VAQD N+L+ +LG  +P +L  A+  DD+ + +D+  G+PS LL RRPDI
Sbjct: 233 RAQLAKYTRQVAQDENSLVLLLGTGVPANLQAAKPLDDD-LLSDVPPGLPSDLLHRRPDI 291

Query: 292 VQAEHALKAANANIGAARAAFFPKIELTATAGTSSSTLSSLFKAGTGAWAFAPSVSVPIF 351
           +QAE+ LKAANANIGAARAAFFP I LTA AGT S  LS LFK G+G W F P +++PIF
Sbjct: 292 LQAEYNLKAANANIGAARAAFFPSISLTANAGTLSPDLSGLFKGGSGTWLFQPQINLPIF 351

Query: 352 DYGSNKASLDVAKIEKQIEVADYESTIQTAFKEVSNALTARATYVDQVLADREYVASSQR 411
           + G+  ASLD +KI+K I VA+YE +IQTAF+EV++ L AR TYV Q+ A +++V+++Q 
Sbjct: 352 NAGALSASLDYSKIQKDIGVANYEKSIQTAFQEVADGLAARQTYVQQLQAQKDFVSANQD 411

Query: 412 YYTLAEARYKAGTDSFLTFLDAQRTLYTAQQQLATDTLSRQANLVTLYKVLSGGWEQ 468
           YY LAE RY+ G DS LTFLDAQR L++AQQ L TD L++  + V LYK L GGW +
Sbjct: 412 YYRLAERRYRIGVDSNLTFLDAQRQLFSAQQVLITDRLAQLVSQVNLYKALGGGWNE 468