Pairwise Alignments

Query, 469 a.a., multidrug transporter from Burkholderia phytofirmans PsJN

Subject, 485 a.a., putative efflux pump outer membrane protein TtgC from Pseudomonas sp. RS175

 Score =  452 bits (1164), Expect = e-132
 Identities = 247/474 (52%), Positives = 320/474 (67%), Gaps = 24/474 (5%)

Query: 1   MAFALAVLAGCTLDPHYERPAAPVAVAYPQGDAYESTSTAAATVAKSASATVVVPPLAVD 60
           +  A  VL+GC+L P Y+RP APVA  YPQG AYE         AK+AS        A +
Sbjct: 8   LTIAAVVLSGCSLIPDYQRPEAPVAAQYPQGPAYEP--------AKAASQA------AAE 53

Query: 61  TAWRSFFRDERLQRLIEIALANNRDLRVAALNVAEYEAQYRITRAALAPSISASGSLTRE 120
             W+ FF D  LQ+LI++AL NNRDLRVAALN+  Y AQYRI RA L P++SA+GS +R+
Sbjct: 54  QGWKQFFHDPALQQLIQVALENNRDLRVAALNIDAYAAQYRIQRADLFPAVSATGSGSRQ 113

Query: 121 RT--------QGVTSSVSDLNVGTTSWEIDFFGRLRSLKRQALENYLATDASRQSTQISL 172
           R         +   SS     +G +++E+D FGR+RSL  QAL++Y AT+ +R+STQISL
Sbjct: 114 RLPARASQTGEAAISSSYSATLGISAYELDLFGRVRSLSEQALQSYFATEEARRSTQISL 173

Query: 173 IATVATDYLTLLSDERLLQLTEDTVKADQSTYDVTKRVQELGNSSLLDVQQAENSLASAK 232
           +A VA  YLT  +D+ LL+LT+DT+   + +  +T R  ++G +S LD+ QA  ++ +A+
Sbjct: 174 VANVANAYLTWQADKELLKLTQDTLATYEQSLQLTTRSADVGVASALDLSQARTAVENAR 233

Query: 233 ASLASYRRAVAQDRNNLIAILGAPIPDDLPPARSFDDESMFADIGAGVPSLLLTRRPDIV 292
             LA Y R VAQD NNL  +LG  +P +L      DD  + +++ AG+PS LL RRPDI+
Sbjct: 234 VQLARYTRQVAQDENNLTLLLGTSLPANLNTQPLSDD--LLSEVPAGLPSDLLQRRPDIL 291

Query: 293 QAEHALKAANANIGAARAAFFPKIELTATAGTSSSTLSSLFKAGTGAWAFAPSVSVPIFD 352
           QAE  L AANANIGAARAAFFP I LTA AGT S  LS LFK G+G W FAP +++PIF+
Sbjct: 292 QAERNLLAANANIGAARAAFFPSISLTANAGTLSPDLSGLFKGGSGTWTFAPQINLPIFN 351

Query: 353 YGSNKASLDVAKIEKQIEVADYESTIQTAFKEVSNALTARATYVDQVLADREYVASSQRY 412
            GS +ASLD AKI+K I VA+YE  IQTAF+EVS+ L AR TY +Q+ A   YVAS+Q Y
Sbjct: 352 AGSLRASLDYAKIQKDINVANYEKAIQTAFQEVSDGLAARRTYNEQLQAQTAYVASNQDY 411

Query: 413 YTLAEARYKAGTDSFLTFLDAQRTLYTAQQQLATDTLSRQANLVTLYKVLSGGW 466
           Y LAE RY+ G DS LTFLDAQR L++AQQ L TD L++  + V LYK L GGW
Sbjct: 412 YRLAERRYRIGVDSNLTFLDAQRQLFSAQQSLITDRLAQLTSEVNLYKALGGGW 465