Pairwise Alignments

Query, 469 a.a., multidrug transporter from Burkholderia phytofirmans PsJN

Subject, 484 a.a., AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor from Pseudomonas fluorescens SBW25

 Score =  423 bits (1088), Expect = e-123
 Identities = 230/473 (48%), Positives = 310/473 (65%), Gaps = 31/473 (6%)

Query: 6   AVLAGCTLDPHYERPAAPVAVAYPQGDAYESTSTAAATVAKSASATVVVPPLAVDTAWRS 65
           ++L+GC+L P Y+RP APV V YPQ   Y      +A                    W+ 
Sbjct: 11  SMLSGCSLIPDYQRPQAPVPVQYPQQGVYAQAQAGSAD-------------------WQQ 51

Query: 66  FFRDERLQRLIEIALANNRDLRVAALNVAEYEAQYRITRAALAPSISASGSLTRERTQG- 124
            F D  LQ+LI  AL NNRDLRVAALNV  ++AQYRI RA L P++SA+G+  R R  G 
Sbjct: 52  LFHDPALQQLIRDALVNNRDLRVAALNVEAFQAQYRIQRADLFPAVSATGAGQRRRLPGD 111

Query: 125 --------VTSSVSDLNVGTTSWEIDFFGRLRSLKRQALENYLATDASRQSTQISLIATV 176
                   +TSS S   +G +++E+DFFGR+RSL  QA+  YL T+ +R+S Q+SL+A V
Sbjct: 112 VNGTGKPAITSSYS-ATLGISAYELDFFGRVRSLSEQAMLTYLGTEEARRSAQLSLVANV 170

Query: 177 ATDYLTLLSDERLLQLTEDTVKADQSTYDVTKRVQELGNSSLLDVQQAENSLASAKASLA 236
           A  YLT  +D+ LL L + T+ A+  +  +T R +  G +S LDV QA  S+ S +AS+A
Sbjct: 171 ANAYLTWRADQELLALAQQTLVANDHSLRLTSRSKTAGKASALDVVQARTSVESTRASVA 230

Query: 237 SYRRAVAQDRNNLIAILGAPIPDDLPPARSFDDESMFADIGAGVPSLLLTRRPDIVQAEH 296
            Y R VAQD NNL  ++G P+ + LP      D    A + AG+PS LL RRPDI+QAE+
Sbjct: 231 RYERQVAQDLNNLALLVGGPVDEQLPARPLAAD--WVARVPAGLPSDLLQRRPDILQAEY 288

Query: 297 ALKAANANIGAARAAFFPKIELTATAGTSSSTLSSLFKAGTGAWAFAPSVSVPIFDYGSN 356
            L+AANANIGAARAAFFP + LTA AG++S+ LS LFK G+G+W F P +++PIF+ GS 
Sbjct: 289 QLRAANANIGAARAAFFPSVSLTANAGSASTELSGLFKGGSGSWTFQPQINLPIFNAGSL 348

Query: 357 KASLDVAKIEKQIEVADYESTIQTAFKEVSNALTARATYVDQVLADREYVASSQRYYTLA 416
           +ASLD AK++K I VA YE +IQTAF+EV++ L AR T++DQ+ A R++VA++Q+YY LA
Sbjct: 349 RASLDYAKLQKDISVAQYEKSIQTAFQEVADGLAARQTFIDQLDAQRDFVAANQQYYKLA 408

Query: 417 EARYKAGTDSFLTFLDAQRTLYTAQQQLATDTLSRQANLVTLYKVLSGGWEQG 469
           E RY++G DS LTFLDAQR L+++QQ L  D L++    V LY  L G W  G
Sbjct: 409 EHRYRSGVDSNLTFLDAQRALFSSQQALIVDRLAQLVAEVNLYTALGGAWGDG 461