Pairwise Alignments

Query, 469 a.a., multidrug transporter from Burkholderia phytofirmans PsJN

Subject, 485 a.a., AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor from Pseudomonas fluorescens SBW25

 Score =  450 bits (1158), Expect = e-131
 Identities = 239/476 (50%), Positives = 320/476 (67%), Gaps = 24/476 (5%)

Query: 1   MAFALAVLAGCTLDPHYERPAAPVAVAYPQGDAYESTSTAAATVAKSASATVVVPPLAVD 60
           +A    VL+GC+L P Y+RP APVA  +PQG AY S    +   A+              
Sbjct: 8   LAVTAFVLSGCSLIPDYQRPEAPVAAQFPQGPAYSSAQAPSQAAAEQG------------ 55

Query: 61  TAWRSFFRDERLQRLIEIALANNRDLRVAALNVAEYEAQYRITRAALAPSISASGSLTRE 120
             W+ FF D  LQ+LI+ AL NNRDLRVAALN+  Y AQYRI RA L P++SA+GS +R+
Sbjct: 56  --WKQFFHDPALQQLIQTALVNNRDLRVAALNIDAYAAQYRIQRADLFPAVSANGSGSRQ 113

Query: 121 RTQGVTSSVSDLNV--------GTTSWEIDFFGRLRSLKRQALENYLATDASRQSTQISL 172
           R     S   + N+        G +S+E+D FGR+RSL  +AL+ Y AT+ +R+STQISL
Sbjct: 114 RVPARASQTGEANITSQYSATLGISSYELDLFGRVRSLSEEALQKYFATEEARRSTQISL 173

Query: 173 IATVATDYLTLLSDERLLQLTEDTVKADQSTYDVTKRVQELGNSSLLDVQQAENSLASAK 232
           +A+VA  YLT  +D+ LL+LT+DT+ A + ++ +T R  E+G +S LD+ QA  S+ +A+
Sbjct: 174 VASVANAYLTWQADKELLKLTQDTLGAFEQSFKLTSRSNEVGVASALDLSQARTSVENAR 233

Query: 233 ASLASYRRAVAQDRNNLIAILGAPIPDDLPPARSFDDESMFADIGAGVPSLLLTRRPDIV 292
             LA Y R VAQD N+L  +LG  +P ++      DD  + +++ AG+PS LL RRPDI+
Sbjct: 234 VQLARYTRQVAQDENSLTLLLGTGLPANIASKPLSDD--LLSEVPAGLPSDLLQRRPDIL 291

Query: 293 QAEHALKAANANIGAARAAFFPKIELTATAGTSSSTLSSLFKAGTGAWAFAPSVSVPIFD 352
           QAE+ LKAANANIGAARAAFFP I LTA AGT S  L  LFK G+G W+FAP +++PIF+
Sbjct: 292 QAEYNLKAANANIGAARAAFFPSISLTANAGTLSPDLGGLFKGGSGTWSFAPQINIPIFN 351

Query: 353 YGSNKASLDVAKIEKQIEVADYESTIQTAFKEVSNALTARATYVDQVLADREYVASSQRY 412
            GS +ASLD +KI+K+I VA+YE  IQT F+EVS+ L +R TY  Q+ A R +VA++Q Y
Sbjct: 352 AGSLRASLDYSKIQKEINVANYEKAIQTGFQEVSDGLASRETYKQQLEAQRGFVAANQDY 411

Query: 413 YTLAEARYKAGTDSFLTFLDAQRTLYTAQQQLATDTLSRQANLVTLYKVLSGGWEQ 468
           Y LAE RY+ G DS LTFLDAQR L++AQQ L TD L++  + V LYK L GGW +
Sbjct: 412 YRLAERRYRIGVDSNLTFLDAQRQLFSAQQSLITDRLAQLTSEVNLYKALGGGWNE 467