Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 521 a.a., aerotaxis receptor, putative from Pseudomonas fluorescens GW456-L13

 Score =  273 bits (699), Expect = 9e-78
 Identities = 192/554 (34%), Positives = 278/554 (50%), Gaps = 72/554 (12%)

Query: 1   MRNNQPVTGHEYEFPSSHMLVSATDLTGRIQYCNPAFIAVSGFTRDELIGQPHNLIRHPD 60
           MR N PVT HE  FP+   L+S TDL  RI YCN AF+A+SGFT DEL+GQ HNL+RHPD
Sbjct: 1   MRVNLPVTEHERVFPTEQRLISTTDLDSRITYCNEAFVAISGFTYDELVGQTHNLVRHPD 60

Query: 61  MPREAFADLWATIRDGRPWTALVKNRRKNGDHYWVHANVTPVVEKGAVVGYLSVRVKPER 120
           MP   F  +W TI+ G+PW  +VKNR KNGD YWV A VTP+ E G + GY SVR  P R
Sbjct: 61  MPPGVFVHMWHTIKQGKPWMGIVKNRSKNGDFYWVSAYVTPIYENGRMSGYESVRSVPSR 120

Query: 121 TAVRAAEALYARMRSGESRGVQLRRGVVVRTGVLGRLQALMRLPVATRAALGYAITPLA- 179
             VR A ALY+RMR+G+                          P+  R+A  +   PL  
Sbjct: 121 DQVRRASALYSRMRAGK--------------------------PIIARSARIFR--PLRQ 152

Query: 180 ---LLLTGLAAWQGAPPAPFWIGFGVATAVSIASC-----LMLTRQLAAPVRDMS----G 227
              LL+ G  +  G+     W+    A  V IAS      L+ +R   A  R ++     
Sbjct: 153 GWPLLMAGGVSMLGSQ----WLSTTAAQGVLIASLGVAWYLIESRNRKAIERTLAEHPKA 208

Query: 228 FATRLAAGDLTADLQIARHDDLGDVLQALNQLKANLAAIVYDVRAQITGMLDNAREISSG 287
           F+  L A   + +       D+  V +   +L+  L+ +V D    +      + E+S  
Sbjct: 209 FSDPLVALTYSDNYGPQGQLDMAMVSEEA-RLQTALSRLV-DAGVNVKAKAAQSSELSGS 266

Query: 288 NVDLARR----TELQAASLEETAATMEELTTTVQANADATVRA-------LDLAREAQAA 336
                 R    T+  AA++ + AAT++E+T  V + A A   A        +LAR++ +A
Sbjct: 267 QAQSLDRQRSETDQSAAAISQMAATIQEVTQNVISTAHAASEADQLTRDGSELARQSLSA 326

Query: 337 AAVGGKIAGQVEQTMAGITAASRRIADITGVIDGIAFQTNILALNAAVEAARAGEAGRSF 396
                +   ++ Q +  + + ++ I  +  VI  IA QTN+LALNAA+EAARAGE GR F
Sbjct: 327 MKTMHEAVNEIGQAVDALASETQSIGSVVDVITSIAEQTNLLALNAAIEAARAGEQGRGF 386

Query: 397 AVVAGEVRMLAQRCAASSKEIKSVV-------EASASEVAAGTEL-------VARTTSQM 442
           AVVA EVR LAQR   S+++I  ++       + + S    G ++       V    S +
Sbjct: 387 AVVADEVRSLAQRTRTSTEQIHGIIASLYAGADRAVSTANRGEQISRESMQSVEAVQSAL 446

Query: 443 RVIDEAVGRVSSIIVDVANASSEQAEGIRQVNQAVSHLDGATQQNAALVEQAAATAQRLA 502
             I +AV R++ +   +A+AS EQ+     +NQ ++ +      +A   +Q AA +Q L 
Sbjct: 447 VGISQAVTRITGMSQQMASASEEQSHVAEDINQQITRIAQLCDHSAGQAKQGAAISQDLE 506

Query: 503 EQADVLDEAVRLFT 516
             AD L      F+
Sbjct: 507 VMADYLHSLAERFS 520