Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 534 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

 Score =  476 bits (1226), Expect = e-139
 Identities = 276/537 (51%), Positives = 350/537 (65%), Gaps = 22/537 (4%)

Query: 1   MRNNQPVTGHEYEFPSSHMLVSATDLTGRIQYCNPAFIAVSGFTRDELIGQPHNLIRHPD 60
           MR N PVTG EYE P    LVS TDL GRI Y NPAF+  SG+  DEL+G+ HN++RHPD
Sbjct: 1   MRVNLPVTGIEYELPRDAALVSRTDLKGRITYVNPAFVEASGYAVDELMGKAHNIVRHPD 60

Query: 61  MPREAFADLWATIRDGRPWTALVKNRRKNGDHYWVHANVTPVVEKGAVVGYLSVRVKPER 120
           +P EAFADLW T+  G PWT ++KNRR NGD YWV ANVTP+   G V GY+SVR +P+R
Sbjct: 61  VPPEAFADLWQTLGQGLPWTGIIKNRRSNGDFYWVLANVTPIRRDGRVQGYMSVRSRPDR 120

Query: 121 TAVRAAEALYARMRSGESRGVQLRRGVVVRTGVLGRLQALMRLPVATRAALGYAITPLAL 180
             V  A+ALY R+R G ++GV L++G VV+ G +  L  L R+PV  R    +  T  A 
Sbjct: 121 ADVAEADALYRRLREGGAKGVTLQQGQVVQRGWMNPLAQLRRIPVRQRV---FGATTAAA 177

Query: 181 LLT---GLAAWQGA-------------PPAPFWIGFGVATAVSIASCLMLTRQLAAPVRD 224
           LLT   G+A W  A             P A    G G A A  +     L R +  P+ +
Sbjct: 178 LLTLGLGIAGWMEAGRLVASAGVHSWLPGALAAGGVGFALAW-LGLGQFLGRTVFRPLDE 236

Query: 225 MSGFATRLAAGDLTADLQIARHDDLGDVLQALNQLKANLAAIVYDVRAQITGMLDNAREI 284
               A  +A GDL A  +I R D++  +L+ALNQ+ ANL AIV DV   + G++  + +I
Sbjct: 237 ALHVARAIAGGDL-AKFEIRRGDEITGLLRALNQMSANLFAIVADVGTNVAGVMSASSQI 295

Query: 285 SSGNVDLARRTELQAASLEETAATMEELTTTVQANADATVRALDLAREAQAAAAVGGKIA 344
           +SGN DL+ RTE QA+SLE+TAA+MEELT+TV+ NAD   +A  LA  A   A  GG + 
Sbjct: 296 ASGNQDLSSRTEQQASSLEQTAASMEELTSTVKQNADNARQANQLAVSASEVAVKGGSVV 355

Query: 345 GQVEQTMAGITAASRRIADITGVIDGIAFQTNILALNAAVEAARAGEAGRSFAVVAGEVR 404
            QV  TM  I A+SR+I DI GVIDGIAFQTNILALNAAVEAARAGE G+ FAVVA EVR
Sbjct: 356 SQVVDTMGSINASSRKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGKGFAVVASEVR 415

Query: 405 MLAQRCAASSKEIKSVVEASASEVAAGTELVARTTSQMRVIDEAVGRVSSIIVDVANASS 464
            LAQR AA++KEIK+++  S  +V AG++ VA     M  I  +V RV+ I+ ++  AS 
Sbjct: 416 SLAQRSAAAAKEIKTLIGDSVEKVEAGSKQVAEAGRTMEEIVGSVRRVTDIMGEITTASQ 475

Query: 465 EQAEGIRQVNQAVSHLDGATQQNAALVEQAAATAQRLAEQADVLDEAVRLFTVADAA 521
           EQ  GI Q+NQA++ +D  TQQNAALVE+A+ATAQ L EQAD L  AVR+F  A+AA
Sbjct: 476 EQTSGIEQINQAIAQMDQVTQQNAALVEEASATAQSLQEQADGLVRAVRVFR-AEAA 531