Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 514 a.a., PAS domain S-box protein from Ralstonia solanacearum PSI07

 Score =  454 bits (1169), Expect = e-132
 Identities = 251/517 (48%), Positives = 337/517 (65%), Gaps = 6/517 (1%)

Query: 1   MRNNQPVTGHEYEFPSSHMLVSATDLTGRIQYCNPAFIAVSGFTRDELIGQPHNLIRHPD 60
           MR N+PVT  EY+FP +  L+S TD    I Y N AF+ VSGF+R+E+ GQPHN++RHPD
Sbjct: 1   MRVNEPVTQREYDFPDNATLMSTTDTQSCIAYANAAFVDVSGFSREEIEGQPHNIVRHPD 60

Query: 61  MPREAFADLWATIRDGRPWTALVKNRRKNGDHYWVHANVTPVVEKGAVVGYLSVRVKPER 120
           MP EAFAD+WAT++ G PWTALVKNRRKNGDHYWV AN TPVV  G   GY+SVR KP R
Sbjct: 61  MPTEAFADMWATLKGGEPWTALVKNRRKNGDHYWVRANATPVVRDGRPAGYMSVRTKPSR 120

Query: 121 TAVRAAEALYARMRSGESRGVQLRRGVVVRTGVLGRLQALMRLPVATRAALGY-AITPLA 179
             V AAEALY   R+G +   Q  +G++VRTG++        +PV  R  L + A+ PL 
Sbjct: 121 DEVAAAEALYRDFRAGRAGSRQFHKGLIVRTGLMAWRSVFQVMPVRWRIRLAFMALLPLT 180

Query: 180 LLLTGLAAWQGAPPAPFWIGFGVATAVSIA-SCLMLTRQLAAPVRDMSGFATRLAAGDLT 238
           L     A   GA       GF VA   ++A     L  Q+A P+      A R+A+G+  
Sbjct: 181 LACAWGAGLSGAALG----GFAVAQLAALALGAWWLQAQIARPLEQTLAQALRVASGESQ 236

Query: 239 ADLQIARHDDLGDVLQALNQLKANLAAIVYDVRAQITGMLDNAREISSGNVDLARRTELQ 298
             + + R D++G  L+ ++QL      ++ DV  Q+  +   ++EI+ GN D+  RTE  
Sbjct: 237 KAVHMDRVDEIGMTLRTISQLGLMFRWLIDDVSEQVLNVQAASQEIARGNGDINTRTEQA 296

Query: 299 AASLEETAATMEELTTTVQANADATVRALDLAREAQAAAAVGGKIAGQVEQTMAGITAAS 358
           A+S+++T+++M ++T TV +NA+    A  L+  A  AA  GG+   +V  TM  IT ++
Sbjct: 297 ASSVQQTSSSMTQMTATVASNAETAGEANQLSGAATEAAVNGGRAVSEVVATMEAITQSA 356

Query: 359 RRIADITGVIDGIAFQTNILALNAAVEAARAGEAGRSFAVVAGEVRMLAQRCAASSKEIK 418
           R+IADI+GVID IAFQTNILALNAAVEAARAGE GR FAVVAGEVR LAQR A+++KEIK
Sbjct: 357 RQIADISGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRALAQRSASAAKEIK 416

Query: 419 SVVEASASEVAAGTELVARTTSQMRVIDEAVGRVSSIIVDVANASSEQAEGIRQVNQAVS 478
            ++ AS  +VA+G+ LV      M  I   V RVS +I ++++A+++QAEGI QV+QAV+
Sbjct: 417 GLIGASVDKVASGSRLVDEAGKTMDDIVSQVKRVSGMIAEISSATAQQAEGIMQVSQAVN 476

Query: 479 HLDGATQQNAALVEQAAATAQRLAEQADVLDEAVRLF 515
           HLD  TQ+NA LVEQ+A  A+ L  QA  L EAV +F
Sbjct: 477 HLDQITQENATLVEQSAMAAESLRVQATRLVEAVGVF 513