Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 521 a.a., Aerotaxis sensor receptor protein from Pseudomonas sp. S08-1

 Score =  280 bits (715), Expect = 1e-79
 Identities = 190/533 (35%), Positives = 270/533 (50%), Gaps = 52/533 (9%)

Query: 1   MRNNQPVTGHEYEFPSSHMLVSATDLTGRIQYCNPAFIAVSGFTRDELIGQPHNLIRHPD 60
           MRNNQPVT  E  FP+   L+S TDL G+I YCN AFI +SGF R+EL+  PHNL+RHPD
Sbjct: 1   MRNNQPVTQRERTFPAQQRLISTTDLKGQITYCNQAFIEISGFEREELLRAPHNLVRHPD 60

Query: 61  MPREAFADLWATIRDGRPWTALVKNRRKNGDHYWVHANVTPVVEKGAVVGYLSVRVKPER 120
           +P   F  +W T++ GRPW  +VKNR KNGDHYWV+A VTP++EKG VVGY SVRVKP  
Sbjct: 61  VPPAVFEHMWQTLKKGRPWMGVVKNRSKNGDHYWVNAYVTPILEKGQVVGYESVRVKPSA 120

Query: 121 TAVRAAEALYARMRSGESRGVQLRRGVVVRTGVLGRLQALMRLPVATRAALGYAITPLAL 180
             +R AEALYAR+ +G+       R + V       LQA   LP    + +G+ I     
Sbjct: 121 EQIRRAEALYARINAGKPAIPATDRWLPV-------LQAW--LPFILISQIGFLI----- 166

Query: 181 LLTGLAAWQGAPPAPFWIGFGVATAVSIASCLMLTRQLAAPVRDMSGFATRLAAGDLTAD 240
                  W G+     W GF +A  +S+   L         V+ +   A +  +  L A 
Sbjct: 167 -----GHWMGST----W-GFLLAALLSVPLGLAGISWQTRGVKRLLRLAEQTTSDPLIAQ 216

Query: 241 LQIARHDDLGDVLQALNQLKANLAAI---VYDVRAQITGMLDNAREI---SSGNVDLAR- 293
           +          +  A+   +A L      + D   ++T     A ++   SS  ++  R 
Sbjct: 217 MYTDSRGAEARLEMAMLSQEARLRTCLTRLQDTAERLTSQAQQADQLAHNSSAGLERQRV 276

Query: 294 RTELQAASLEETAATMEELTTTVQANADATVRALDLAREAQAAAAVG-------GKIAGQ 346
            TE  A ++ E AAT  E+ + V   A AT  A  L  E +  AA             G+
Sbjct: 277 ETEQVATAINEMAATTLEVASNVARAAIATQEANRLTGEGRNVAAETRDAIQRLSTSVGE 336

Query: 347 VEQTMAGITAASRRIADITGVIDGIAFQTNILALNAAVEAARAGEAGRSFAVVAGEVRML 406
             +T++ +   S  I  +  VI GIA QTN+LALNAA+EAARAGE GR FAVVA EVR L
Sbjct: 337 TGETVSRLAQDSNEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRSL 396

Query: 407 AQRCAASSKEIKSVV--------------EASASEVAAGTELVARTTSQMRVIDEAVGRV 452
           AQR A S+ +I +++              E    +   G E V +    ++ I +AV  +
Sbjct: 397 AQRTAESTGQIHALIAKLQRTAEEAVMTMEIGRKQADEGVERVQQADQALQGISDAVANI 456

Query: 453 SSIIVDVANASSEQAEGIRQVNQAVSHLDGATQQNAALVEQAAATAQRLAEQA 505
           + +   +A A+ EQ+    ++NQ ++ +     Q ++     A  ++ L   A
Sbjct: 457 TDMANQIAAAAEEQSAVADEINQNITTIAQLADQTSSEAHSTAQLSEELTSTA 509