Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 521 a.a., Aerotaxis receptor from Pseudomonas sp. RS175

 Score =  273 bits (697), Expect = 2e-77
 Identities = 181/539 (33%), Positives = 268/539 (49%), Gaps = 44/539 (8%)

Query: 1   MRNNQPVTGHEYEFPSSHMLVSATDLTGRIQYCNPAFIAVSGFTRDELIGQPHNLIRHPD 60
           MRNNQPVT  E  FP+   L+S T+  G I YCN AF+ +SGF+++ELIG PHNL+RHPD
Sbjct: 1   MRNNQPVTQRERTFPAQQRLISTTNAKGVITYCNDAFVEISGFSKEELIGSPHNLVRHPD 60

Query: 61  MPREAFADLWATIRDGRPWTALVKNRRKNGDHYWVHANVTPVVEKGAVVGYLSVRVKPER 120
           +P   FA +W T++ G PW  +VKNR K+GDHYWV+A VTP+ E   V+GY SVRVKP  
Sbjct: 61  VPSAVFAHMWNTLKQGLPWMGIVKNRCKSGDHYWVNAYVTPIFEGNQVIGYESVRVKPTA 120

Query: 121 TAVRAAEALYARMRSGESRGVQLRRGVVVRTGVLGRL---QALMRLPVATRAALGYAITP 177
             V  AEALY R+  G+    +  + + +    L  +   Q    +     ++ G+A+  
Sbjct: 121 EQVSRAEALYRRINQGKPAVPRSDKWLPILQDWLPFILVSQLSFIVGAFLNSSWGFALAA 180

Query: 178 LALLLTGLAAWQGAPPAPFWIGFGVATAVSIASCLMLTRQLAAPVRDMSGFATRLAAGDL 237
           L  +  GL   Q       W   G+   + +A        +A    D  G   RL    L
Sbjct: 181 LLSVPLGLMGLQ-------WQQRGIKRLLRLAEQTTSDPLIAQMYTDSRGVQARLEMSIL 233

Query: 238 TADLQIARHDDLGDVLQALNQLKANLAAIVYDVRAQITGMLDNAREISSGNVDLARRTEL 297
           + + ++            L +L+ + A  + D   Q   +  N+   SSG       TE 
Sbjct: 234 SQEARLK---------TCLTRLQ-DTAEHLNDQARQSNALAHNS---SSGLERQRVETEQ 280

Query: 298 QAASLEETAATMEELTTTVQANADATV-------RALDLAREAQAAAAVGGKIAGQVEQT 350
            A ++ + AAT +E+ + VQ  ADAT        R  D+A E + A      + G+  QT
Sbjct: 281 VATAVNQMAATTQEVASHVQRTADATQEANRLTGRGRDIAGETREAIERLSVVVGETGQT 340

Query: 351 MAGITAASRRIADITGVIDGIAFQTNILALNAAVEAARAGEAGRSFAVVAGEVRMLAQRC 410
           +  +   S  I  +  VI GIA QTN+LALNAA+EAARAGE GR FAVVA EVR LAQR 
Sbjct: 341 VTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRT 400

Query: 411 AASSKEIKSVV--------------EASASEVAAGTELVARTTSQMRVIDEAVGRVSSII 456
           + S+ +I +++              +A   +   G   V      +  I EAV  ++ + 
Sbjct: 401 SESTGQIHALIAKLQQTANNAVQTMDAGHRQAEEGVARVMEADQALVGISEAVANITDMT 460

Query: 457 VDVANASSEQAEGIRQVNQAVSHLDGATQQNAALVEQAAATAQRLAEQADVLDEAVRLF 515
             +A A+ EQ+    ++++ +S++     Q +     +A  ++ L   A+     V  F
Sbjct: 461 TQIAAATEEQSSVAEEISRNISNISELADQTSDQAHNSALLSEELTRTANTQYSLVERF 519