Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 521 a.a., Aerotaxis receptor from Pseudomonas sp. DMC3

 Score =  268 bits (684), Expect = 5e-76
 Identities = 179/543 (32%), Positives = 270/543 (49%), Gaps = 52/543 (9%)

Query: 1   MRNNQPVTGHEYEFPSSHMLVSATDLTGRIQYCNPAFIAVSGFTRDELIGQPHNLIRHPD 60
           MRNNQP+T  E  FP+   L+S TD  G I YCN  F+ +SGF+R+ELI  PHNL+RHPD
Sbjct: 1   MRNNQPITQRERTFPAQQRLISTTDAKGVITYCNDDFVEISGFSREELIRAPHNLVRHPD 60

Query: 61  MPREAFADLWATIRDGRPWTALVKNRRKNGDHYWVHANVTPVVEKGAVVGYLSVRVKPER 120
           +P   F+ +W T++ G PW  +VKNR K+GDHYWV+A VTPV +   V+GY SVRVKP  
Sbjct: 61  VPSAVFSHMWGTLKQGLPWMGIVKNRCKSGDHYWVNAYVTPVFDGNQVIGYESVRVKPTA 120

Query: 121 TAVRAAEALYARMRSGESRGVQLRRGVVVRTGVLGRLQALMRLPVATRAALGYAITPLAL 180
             +R AEALY R+  G+S        +      L  LQ  +                  +
Sbjct: 121 EQIRRAEALYQRINQGKS-------AIPSTDKWLPLLQDWLPF----------------I 157

Query: 181 LLTGLAAWQGAPPAPFWIGFGVATAVSIASCLMLTRQLAAPVRDMSGFATRLAAGDLTAD 240
           L++ L+   GA     W GF +A A+S+   LM  +     ++ +   A +  +  L A 
Sbjct: 158 LVSQLSFMIGATLNSQW-GFALAAALSVPLGLMGLQWQQRGLKRLLRLAEQTTSDPLIAQ 216

Query: 241 LQIARHDDLGDVLQALNQLKANLAAIVYDVRAQITGMLDNAREI------SSGNVDLAR- 293
           +          +  ++   +A L   +  ++     + D A++       SS  ++  R 
Sbjct: 217 MYTDSRGAQARLEMSILSQEARLKTCLTRLQDTAEHLTDQAKQSDALAHNSSTGLERQRV 276

Query: 294 RTELQAASLEETAATMEELTTTVQANADATV-------RALDLAREAQAAAAVGGKIAGQ 346
            TE  A ++ + AAT +E+ + VQ  ADAT        R  D+A E + A      + G+
Sbjct: 277 ETEQVATAVNQMAATTQEVASHVQRTADATQEANRLTGRGRDIAGETREAIQRLSVVVGE 336

Query: 347 VEQTMAGITAASRRIADITGVIDGIAFQTNILALNAAVEAARAGEAGRSFAVVAGEVRML 406
              T+  +   S  I  +  VI GIA QTN+LALNAA+EAARAGE GR FAVVA EVR L
Sbjct: 337 TGLTVTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQL 396

Query: 407 AQRCAASSKEIKSVV--------------EASASEVAAGTELVARTTSQMRVIDEAVGRV 452
           AQR + S+ +I +++              EA   +   G   V      +  I EAV  +
Sbjct: 397 AQRTSESTGQIHALIAKLQQTASSAVQTMEAGHRQAEEGVARVLEADQALVGISEAVANI 456

Query: 453 SSIIVDVANASSEQAEGIRQVNQAVSHLDGATQQNAALVEQAAATAQRLAEQADVLDEAV 512
           + +   +A A+ EQ+    ++++ +S++     Q +     +A  ++ L + A+     V
Sbjct: 457 TDMTTQIAAATEEQSAVAEEISRNISNISELADQTSEQAHNSALLSEELTKTANTQYSLV 516

Query: 513 RLF 515
             F
Sbjct: 517 ARF 519