Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 521 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25

 Score =  271 bits (692), Expect = 6e-77
 Identities = 188/523 (35%), Positives = 266/523 (50%), Gaps = 54/523 (10%)

Query: 1   MRNNQPVTGHEYEFPSSHMLVSATDLTGRIQYCNPAFIAVSGFTRDELIGQPHNLIRHPD 60
           MRNNQPVT  E  FP+   L+S TD  G I YCN AF+ +SGF+RDEL+  PHNL+RHPD
Sbjct: 1   MRNNQPVTQRERTFPAQQRLISTTDAKGVITYCNDAFVEISGFSRDELVRAPHNLVRHPD 60

Query: 61  MPREAFADLWATIRDGRPWTALVKNRRKNGDHYWVHANVTPVVEKGAVVGYLSVRVKPER 120
           +P   FA +W+T++ G PW  +VKNR K GDHYWV+A VTPV E   VVGY SVR+KP  
Sbjct: 61  VPGAVFAHMWSTLKQGLPWMGIVKNRCKTGDHYWVNAYVTPVFEGNQVVGYESVRIKPTA 120

Query: 121 TAVRAAEALYARMRSGESRGVQLRRGVVVRTGVLGRL---QALMRLPVATRAALGYAI-- 175
             +R AEALY R+  G+S   Q  + + V    L  +   Q    +  +  +  G+A+  
Sbjct: 121 EQIRRAEALYQRINQGKSAIPQRDKWLPVLQDWLPFILVSQLSFMIGASLNSHWGFALAA 180

Query: 176 ---TPLALLLTGLAAWQGAPPAPFWIGFGVATAVSIASCLMLTRQLAAPVRDMSGFATRL 232
               PL LL  GL+          W   G+   + +A        +A    D  G   RL
Sbjct: 181 GLSVPLGLL--GLS----------WQQRGLKRLLRLAEQTTSDPLIAQMYTDSRGAQARL 228

Query: 233 AAGDLTADLQIARHDDLGDVLQALNQLKANLAAIVYDVRAQITGMLDNAREISSGNVDLA 292
               L+ + ++            L +L+ + A  + D  AQ   +  N+   SSG     
Sbjct: 229 EMSILSQEARLK---------TCLTRLQ-DTAEHLNDQAAQSNTLAHNS---SSGLERQR 275

Query: 293 RRTELQAASLEETAATMEELTTTVQANADATV-------RALDLAREAQAAAAVGGKIAG 345
             TE  A ++ + AAT +E+ + VQ  ADAT        R  D+A E + A        G
Sbjct: 276 VETEQVATAVNQMAATTQEVASHVQRTADATQEANRLTGRGRDIAGETREAIQRLSVAVG 335

Query: 346 QVEQTMAGITAASRRIADITGVIDGIAFQTNILALNAAVEAARAGEAGRSFAVVAGEVRM 405
           +   T+  +   S  I  +  VI GIA QTN+LALNAA+EAARAGE GR FAVVA EVR 
Sbjct: 336 ETGVTVTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQ 395

Query: 406 LAQRCAASSKEIKSVVEASASEVAAGTELVARTTSQMRVIDEAVGRVSSIIVDVANASSE 465
           LAQR A S+ +I +++       AA  + +    +  R  +E V RV            E
Sbjct: 396 LAQRTAESTGQIHALIAKLQQTAAAAVQTM---DAGHRQAEEGVARV-----------ME 441

Query: 466 QAEGIRQVNQAVSHLDGATQQNAALVEQAAATAQRLAEQADVL 508
             + +  +++AV+H+   T Q AA  E+ ++ A+ ++     +
Sbjct: 442 ADQALVGISEAVAHITDMTTQIAAATEEQSSVAEEISRNISTI 484