Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 517 a.a., PAS domain-containing methyl-accepting chemotaxis protein from Pectobacterium carotovorum WPP14

 Score =  374 bits (959), Expect = e-108
 Identities = 208/518 (40%), Positives = 313/518 (60%), Gaps = 2/518 (0%)

Query: 1   MRNNQPVTGHEYEFPSSHMLVSATDLTGRIQYCNPAFIAVSGFTRDELIGQPHNLIRHPD 60
           MR N PV+  +Y       L+S T     I Y N  FI  SG+  +E++ QPHN++RHPD
Sbjct: 1   MRKNFPVSDIQYLLDEKAKLMSVTTTDSHITYANDDFIDASGYDFEEILHQPHNIVRHPD 60

Query: 61  MPREAFADLWATIRDGRPWTALVKNRRKNGDHYWVHANVTPVVEKGAVVGYLSVRVKPER 120
           MP +AFAD+WAT++ G+ WTA+VKNRRK+GD+YWV A+ TP++++G + GY+SVR +  +
Sbjct: 61  MPPQAFADMWATLKAGKIWTAVVKNRRKSGDYYWVKASTTPLMKEGKITGYMSVRTRVSQ 120

Query: 121 TAVRAAEALYARMRSGESRGVQLRRGVVVRTGVLGRLQALMRLPVATRAALGYAITPLAL 180
             +R AEALY +M   + +  +L +G+++  G L  L     +P+  R      +  L  
Sbjct: 121 EEIRQAEALYHQMNENKLKNRRLFQGLLIYKGPLKLLSLFTVIPIRWRIRSYVFLFMLFA 180

Query: 181 LLTGLAAWQGAPPAPFWIGFGVATAVSIASCLMLTRQLAAPVRDMSGFATRLAAGDLTAD 240
           LL  LA      P   ++   +    +I S L L + LA P+  +   A   A+G     
Sbjct: 181 LLFLLATLPLTTPLLTFV-LALLAGATITSEL-LVQHLAKPLEKILRQAINSASGQADNS 238

Query: 241 LQIARHDDLGDVLQALNQLKANLAAIVYDVRAQITGMLDNAREISSGNVDLARRTELQAA 300
            Q+ R D++G +L+A+NQ   N    V DV  ++  +     EI+SGN  L++R E  A 
Sbjct: 239 FQLNRVDEVGMLLRAVNQSGMNFRTFVDDVNGKLAELRHACGEIASGNYTLSQRCEDTAQ 298

Query: 301 SLEETAATMEELTTTVQANADATVRALDLAREAQAAAAVGGKIAGQVEQTMAGITAASRR 360
           SL+ TA++MEELT T+Q+NA AT  A   A +A  A   G K   QV  TMA +T +S+ 
Sbjct: 299 SLQSTASSMEELTATIQSNASATQLATRCANDANQAVNAGEKAVNQVTDTMATMTRSSKE 358

Query: 361 IADITGVIDGIAFQTNILALNAAVEAARAGEAGRSFAVVAGEVRMLAQRCAASSKEIKSV 420
           I DI  V+D +AFQTNILALNAAVEAA AGE G+SFAVVAGEVR+LAQR AA++K+I ++
Sbjct: 359 ITDIISVLDNLAFQTNILALNAAVEAAHAGEQGKSFAVVAGEVRILAQRSAAAAKDIAAI 418

Query: 421 VEASASEVAAGTELVARTTSQMRVIDEAVGRVSSIIVDVANASSEQAEGIRQVNQAVSHL 480
           ++A+ + +    +LV  T+  M  I   V +VS ++  ++ A+ EQ++G+ Q+N AV+++
Sbjct: 419 IDATIANIHTSDKLVNHTSQSMNNILAQVQQVSQLVNQISLATQEQSQGLGQINSAVNNI 478

Query: 481 DGATQQNAALVEQAAATAQRLAEQADVLDEAVRLFTVA 518
           D  T+QN  L   +++    L +Q   + EAV +F+ +
Sbjct: 479 DELTRQNTILATHSSSAINSLEQQISTMSEAVSVFSTS 516