Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 514 a.a., PAS domain-containing methyl-accepting chemotaxis protein from Pantoea agglomerans CFBP13505 P0401

 Score =  417 bits (1073), Expect = e-121
 Identities = 239/515 (46%), Positives = 319/515 (61%), Gaps = 2/515 (0%)

Query: 1   MRNNQPVTGHEYEFPSSHMLVSATDLTGRIQYCNPAFIAVSGFTRDELIGQPHNLIRHPD 60
           MRNNQPV+  EY F  +  L+S TDL   I Y N AFI  SGFT DE+ GQPHN++RHPD
Sbjct: 1   MRNNQPVSQREYLFDDNATLMSTTDLNSHITYANDAFIEASGFTADEINGQPHNMVRHPD 60

Query: 61  MPREAFADLWATIRDGRPWTALVKNRRKNGDHYWVHANVTPVVEKGAVVGYLSVRVKPER 120
           MP EAFAD+WAT++ G PWTALVKNRRKNGDHYWV AN  PVV  G V GY+SVR KP  
Sbjct: 61  MPSEAFADMWATLKQGEPWTALVKNRRKNGDHYWVRANAIPVVRDGKVQGYMSVRTKPTA 120

Query: 121 TAVRAAEALYARMRSGESRGVQLRRGVVVRTGVLGRLQALMRLPVATRAALGYAITPLAL 180
             VR  E LY   R G +RG +  +G++VR+G       L  LP+  R      +T L L
Sbjct: 121 EEVRQTEVLYQDFREGRARGRRFHKGLLVRSGWRRPASILKTLPLRWRIRTTL-LTLLPL 179

Query: 181 LLTGLAAWQGAPPAPFWIGFGVATAVSIASCLMLTRQLAAPVRDMSGFATRLAAGDLTAD 240
            + G+ A    P A      G+A  + + S L L +Q++ P+  M   A  +A G     
Sbjct: 180 SVAGVWALGMTPAALAGFTAGMAALLLLCS-LWLEQQISRPIERMCKQALSVATGASHKV 238

Query: 241 LQIARHDDLGDVLQALNQLKANLAAIVYDVRAQITGMLDNAREISSGNVDLARRTELQAA 300
            Q+ R D++G  L+A+ QL      +V DV  Q   +L  +  I+  N +L+RRTE  AA
Sbjct: 239 EQMDRVDEVGVTLRAIGQLGLMFRWLVDDVSGQAINVLSASDAIARSNNELSRRTEQAAA 298

Query: 301 SLEETAATMEELTTTVQANADATVRALDLAREAQAAAAVGGKIAGQVEQTMAGITAASRR 360
           ++++TAATM E+T TV++N +    A  L+     AA+ GG++  ++   M  I  +S+R
Sbjct: 299 NVQQTAATMNEMTATVKSNTETAHEANTLSAGTSHAASKGGEVMTEMMGMMGEIADSSKR 358

Query: 361 IADITGVIDGIAFQTNILALNAAVEAARAGEAGRSFAVVAGEVRMLAQRCAASSKEIKSV 420
           IA+IT VIDGIAFQTNILALNAAVEAARAGE G+ FAVVAGEVR LAQR A ++ EIK +
Sbjct: 359 IANITSVIDGIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRSLAQRSAKAASEIKML 418

Query: 421 VEASASEVAAGTELVARTTSQMRVIDEAVGRVSSIIVDVANASSEQAEGIRQVNQAVSHL 480
           VE SAS V +G E  +     M+ I   V  V+++I  ++ A++EQA  + +V+ AV  L
Sbjct: 419 VETSASRVNSGNEHASAAGRTMQDIVSQVQNVTALIAQISAATAEQATALSEVSSAVEDL 478

Query: 481 DGATQQNAALVEQAAATAQRLAEQADVLDEAVRLF 515
           D  T QNAA V ++A  + R+  QA+ L EA+ +F
Sbjct: 479 DDITHQNAARVTESAEASGRMTHQANRLVEAISVF 513