Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 506 a.a., aerotaxis sensor receptor Aer from Escherichia coli ECRC98

 Score =  342 bits (878), Expect = 2e-98
 Identities = 192/512 (37%), Positives = 302/512 (58%), Gaps = 10/512 (1%)

Query: 1   MRNNQPVTGHEYEFPSSHMLVSATDLTGRIQYCNPAFIAVSGFTRDELIGQPHNLIRHPD 60
           M ++  VT           L+S TDL   I + N  F+ VSGFT  EL GQPHN++RHPD
Sbjct: 1   MSSHPYVTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGFTLQELQGQPHNMVRHPD 60

Query: 61  MPREAFADLWATIRDGRPWTALVKNRRKNGDHYWVHANVTPVVEKGAVVGYLSVRVKPER 120
           MP+ AFAD+W T++ G PW+ +VKNRRKNGDHYWV AN  P+V +G + GY+S+R +   
Sbjct: 61  MPKAAFADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPMVREGKISGYMSIRTRATD 120

Query: 121 TAVRAAEALYARMRSGESRGVQLRRGVVVRTGVLGRLQALMRLPVATRAALGYAITPLAL 180
             + A E LY  + +G + G ++ +G+VVR G LG+L +L   P+  RA     +  L  
Sbjct: 121 EEIAAVEPLYKALNAGRT-GKRIHKGLVVRKGWLGKLPSL---PLRWRAR---GVMTLMF 173

Query: 181 LLTGLAAWQGAPPAPFWIGFGVATAVSIASCLMLTRQLAAPVRDMSGFATRLAAGDLTAD 240
           +L     W  A P   +I   +   V + +      Q+  P+ +++  A ++A G+  + 
Sbjct: 174 ILLAAMLWFVAAPVVTYI---LCALVVLLASACFEWQIVRPIENVARQALKVATGERNSV 230

Query: 241 LQIARHDDLGDVLQALNQLKANLAAIVYDVRAQITGMLDNAREISSGNVDLARRTELQAA 300
             + R D+LG  L+A+ QL      ++ DV +Q++ + + +  ++ G  +L   T+    
Sbjct: 231 EHLNRSDELGLTLRAVGQLGLMCRWLINDVSSQVSSVRNGSETLAKGTDELNEHTQQTVD 290

Query: 301 SLEETAATMEELTTTVQANADATVRALDLAREAQAAAAVGGKIAGQVEQTMAGITAASRR 360
           ++++T ATM ++  +V+ N+     A  L+  A  AA  GG+    V +TM  I  +++R
Sbjct: 291 NVQQTVATMNQMAASVKQNSATASAADKLSITASNAAVQGGEAMTTVIKTMDDIADSTQR 350

Query: 361 IADITGVIDGIAFQTNILALNAAVEAARAGEAGRSFAVVAGEVRMLAQRCAASSKEIKSV 420
           I  IT +I+ IAFQTNILALNAAVEAARAGE G+ FAVVAGEVR LA R A ++ +I+ +
Sbjct: 351 IGTITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRSANAANDIRKL 410

Query: 421 VEASASEVAAGTELVARTTSQMRVIDEAVGRVSSIIVDVANASSEQAEGIRQVNQAVSHL 480
           ++ASA +V +G++ V      M  I   V  V+ +I  +++++ EQA+G+  + +AV  L
Sbjct: 411 IDASADKVQSGSQQVHAAGRTMEDIVAQVKNVTQLIAQISHSTLEQADGLSSLTRAVDEL 470

Query: 481 DGATQQNAALVEQAAATAQRLAEQADVLDEAV 512
           +  TQ+NA LVE++A  +  +  +A  L++AV
Sbjct: 471 NLITQKNAELVEESAQVSAMVKHRASRLEDAV 502