Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 515 a.a., PAS domain-containing protein from Dickeya dianthicola 67-19

 Score =  398 bits (1022), Expect = e-115
 Identities = 219/517 (42%), Positives = 309/517 (59%), Gaps = 5/517 (0%)

Query: 1   MRNNQPVTGHEYEFPSSHMLVSATDLTGRIQYCNPAFIAVSGFTRDELIGQPHNLIRHPD 60
           MRNNQPVT  EY F     L+S TD+   I Y N AFI VSGF  DE+ GQPHN +RHPD
Sbjct: 1   MRNNQPVTQREYVFDKDATLMSVTDVNSHIVYANDAFIQVSGFEPDEIDGQPHNFVRHPD 60

Query: 61  MPREAFADLWATIRDGRPWTALVKNRRKNGDHYWVHANVTPVVEKGAVVGYLSVRVKPER 120
           MP EAF D+W T++   PWTALVKNRRKNGDHYWV AN  P+V +G   GY+SVR +P R
Sbjct: 61  MPVEAFRDMWQTLKQQEPWTALVKNRRKNGDHYWVRANAVPIVRQGRTTGYMSVRTQPSR 120

Query: 121 TAVRAAEALYARMRSGESRGVQLRRGVVVRTGVLGRLQALMRLPVATRAALGYAITPLAL 180
             V AAEALY  MR  + + ++L +GV+ R G+ G    L  + +  R      +  L  
Sbjct: 121 QEVDAAEALYQSMRRDQGKNLKLHKGVLFRAGLTGLFSRLKLISMRWRLR---GLIMLTA 177

Query: 181 LLTGLAAW--QGAPPAPFWIGFGVATAVSIASCLMLTRQLAAPVRDMSGFATRLAAGDLT 238
           L++ +  W   G   A F+I     T + +    +L  QL  P+  +   A  +A G++ 
Sbjct: 178 LISYVVFWTIHGNFDADFYISSAFMTGMMLLLDGLLEWQLIKPIEMVKQQALNIATGNVN 237

Query: 239 ADLQIARHDDLGDVLQALNQLKANLAAIVYDVRAQITGMLDNAREISSGNVDLARRTELQ 298
                 R D++G + +A+ QL      +V D+  Q+  +   + E++ G+ D++   E  
Sbjct: 238 TIDYGNRADEIGTIQRAIGQLGLMFRWLVDDISTQVLNIRSASDELAHGSEDMSDHAERT 297

Query: 299 AASLEETAATMEELTTTVQANADATVRALDLAREAQAAAAVGGKIAGQVEQTMAGITAAS 358
           AA++++TAA M ++ TTVQ N   T  A   A  A  AA  GG++ G++E+TM  I A+S
Sbjct: 298 AANVQQTAAAMNQINTTVQTNTTTTSEASQQAATACDAAISGGRVIGEMEKTMDSIVASS 357

Query: 359 RRIADITGVIDGIAFQTNILALNAAVEAARAGEAGRSFAVVAGEVRMLAQRCAASSKEIK 418
            +IA IT +ID IAFQTNILALNAAVEAARAGE G+ FAVVAGEVR LAQR A+++ EIK
Sbjct: 358 EKIAGITSIIDNIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRSLAQRSASAANEIK 417

Query: 419 SVVEASASEVAAGTELVARTTSQMRVIDEAVGRVSSIIVDVANASSEQAEGIRQVNQAVS 478
            ++E+S  +V  G+  V       + I   V  VS +I  +A+++ EQ  G+ ++ +AV 
Sbjct: 418 QLIESSVEQVRYGSSHVRDAGDSTQNIVTRVNSVSQLISHIADSTKEQTIGLSEIGRAVE 477

Query: 479 HLDGATQQNAALVEQAAATAQRLAEQADVLDEAVRLF 515
            L+  TQ+NA+ V   A  + +L  QA  L++A+ +F
Sbjct: 478 ELEQITQKNASQVNACAQASDQLKVQAHRLEQALHVF 514