Pairwise Alignments

Query, 510 a.a., ABC transporter for L-rhamnose/L-fucose/xylitol, ATPase component (from data) from Burkholderia phytofirmans PsJN

Subject, 503 a.a., sugar ABC transporter ATP-binding protein from Pseudomonas fluorescens SBW25

 Score =  288 bits (736), Expect = 4e-82
 Identities = 173/473 (36%), Positives = 268/473 (56%), Gaps = 18/473 (3%)

Query: 20  VTKRFGSTAALNDVSIRVMPGESHALVGRNGAGKSTLVSILTGLRKPDTG-EVRFSGAAA 78
           ++K +G    L+ V++ + PGE  AL+G NGAGKSTL SI+ GL +P+ G  + + GA  
Sbjct: 20  ISKAYGPVQVLSQVNVDIRPGEVLALLGENGAGKSTLSSIIAGLVQPEAGGSMTWLGAPY 79

Query: 79  PSIADRDAWRERVACVYQHSTIIRDLSVAENLFINRQPLRGGVIDWQAMRRDARALLDHW 138
              +   A    +  ++Q   ++  LS+AEN+F+ R P+R G +D + M   A+  L+  
Sbjct: 80  APASPGAALGAGIGLIHQEIRLLPQLSIAENIFVGRLPMRHGRVDREYMEAQAQIQLERL 139

Query: 139 KIDVREDARAGDLSVEARQLVEIARALSYGARFIILDEPTAQLDGDEIKRLFRRISELQR 198
            + V    +   LSV A+QLVEIA+AL+  A  +ILDEPTA L G+E + LF+++  L+ 
Sbjct: 140 GLKVPASRKVEGLSVAAQQLVEIAKALTLKASLLILDEPTAALGGEETELLFKQVERLKA 199

Query: 199 EGVTFLFISHHLQEVYEICQAVTVLRDARHIVSAPVSALPREQLIEAMTGERGGLAVADA 258
           EGV+F++ISH L+E+  I   V VLRD R I     + +P  +L+E M G          
Sbjct: 200 EGVSFIYISHRLEEIARIADRVLVLRDGRQIALHATAQVPVRELVEQMVGR--------- 250

Query: 259 AARGALPADTA----VALELKELTGADY--EGVSFTVKRGEVVGLTGATSSGRTSVAEAI 312
           +     PA  A    V L++K+L+  ++   G+ F+V+ GEV G+ G   +GRT +   I
Sbjct: 251 SLERIFPALQAPQEQVMLQVKDLSCREFALHGIDFSVRAGEVFGIAGVVGAGRTELVRTI 310

Query: 313 AGLRAAKRGTISVDGAILPPGDVPASLAHGIGCVPKDRHHEGLVLTQSVAENASMTIARV 372
           AG     +G + +DG +        ++  G+  VP+DR  +G+V+   + +N       +
Sbjct: 311 AGAAQDIQGHLVLDGEVRHLRSPFEAIQAGVVLVPEDRKQQGVVVEHRIEDNLIYGNTDL 370

Query: 373 LGKFGIAAPAKKNAFGQKMIDALGIVAQGPEHVVSGLSGGNQQKVVMARALATNPNVLVL 432
           L K G   PA    F +  +  LG V   P+  +S LSGGNQQKV++A+ LA NP V +L
Sbjct: 371 LDKRGWVFPAPLREFARTAVARLG-VKGAPQSRISSLSGGNQQKVIIAKWLARNPKVFIL 429

Query: 433 IDPTAGVDVKSKEALLSVVDRVREEGKAVLVVSGELDD-LRTCDRVLVMFRGR 484
            +PT G+DV ++ A+  V+  +  +G AV+VVS +LD+ L    RV+VM RGR
Sbjct: 430 DEPTRGIDVGARAAIYEVIADLAAKGMAVIVVSSDLDEVLGLSHRVMVMSRGR 482



 Score = 56.2 bits (134), Expect = 3e-12
 Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 7/207 (3%)

Query: 29  ALNDVSIRVMPGESHALVGRNGAGKSTLVSILTGLRKPDTGEVRFSGAAAPSIADRDAWR 88
           AL+ +   V  GE   + G  GAG++ LV  + G  +   G +   G      +  +A +
Sbjct: 279 ALHGIDFSVRAGEVFGIAGVVGAGRTELVRTIAGAAQDIQGHLVLDGEVRHLRSPFEAIQ 338

Query: 89  ERVACVYQ---HSTIIRDLSVAENLFINRQPL---RGGVIDWQAMRRDARALLDHWKIDV 142
             V  V +      ++ +  + +NL      L   RG V     +R  AR  +    +  
Sbjct: 339 AGVVLVPEDRKQQGVVVEHRIEDNLIYGNTDLLDKRGWVFP-APLREFARTAVARLGVKG 397

Query: 143 REDARAGDLSVEARQLVEIARALSYGARFIILDEPTAQLDGDEIKRLFRRISELQREGVT 202
              +R   LS   +Q V IA+ L+   +  ILDEPT  +D      ++  I++L  +G+ 
Sbjct: 398 APQSRISSLSGGNQQKVIIAKWLARNPKVFILDEPTRGIDVGARAAIYEVIADLAAKGMA 457

Query: 203 FLFISHHLQEVYEICQAVTVLRDARHI 229
            + +S  L EV  +   V V+   R +
Sbjct: 458 VIVVSSDLDEVLGLSHRVMVMSRGRQM 484