Pairwise Alignments

Query, 638 a.a., membrane protein from Burkholderia phytofirmans PsJN

Subject, 344 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 53.1 bits (126), Expect = 2e-11
 Identities = 56/197 (28%), Positives = 85/197 (43%), Gaps = 13/197 (6%)

Query: 291 APQRFADLRSKLCWLPATRATTAALLAMLIGHSLSPERWFWAVITTFVVFLGTRSRADTV 350
           A Q F  L     W P  +   A  LA ++  +L     FWAV++  +V     S   T+
Sbjct: 6   ALQHFTGLWRHGRWRPGVQLAGAVALAWIVSVALHLPESFWAVMSVLIVM--RPSAGSTL 63

Query: 351 YRGAQRLVGTLAGALVSVLLVAPLHDS----PVLLVIAMVLCVFGWAYYILSAYAPGVFF 406
             G  R+ GT AGAL  +  V   H      PV L + M+L   G A   L + AP    
Sbjct: 64  DAGWDRVRGTAAGALCGLAGVYLQHHGVPVLPVTLAVVMLLAFAGAAVPGLRS-APVAAL 122

Query: 407 ITVLVGLVYGELGFAMGPLVELRIEEVLVGCLVSFAVAILMMPLAATRHVEARLAAVLGA 466
           I +  G   G  G +   +  LR+ ++ +G  V+ AV+ +M    A    +   AA+   
Sbjct: 123 IILSAG---GIPGHSALQVAVLRMVQIGIGVGVALAVSTVMSEYHAGARFDEGCAAL--- 176

Query: 467 LRDVVRLSGAGPQAAEA 483
           LR + +     P+ A+A
Sbjct: 177 LRGIAKRMAGTPRPADA 193