Pairwise Alignments

Query, 260 a.a., ABC transporter from Burkholderia phytofirmans PsJN

Subject, 519 a.a., dipeptide ABC transporter ATP-binding protein from Paraburkholderia sabiae LMG 24235

 Score =  206 bits (525), Expect = 6e-58
 Identities = 114/258 (44%), Positives = 167/258 (64%), Gaps = 17/258 (6%)

Query: 1   MIDVDALTVRFKTK---------TGYFEAVREASFHVGEGEVFGLVGESGSGKSTILRAL 51
           ++D   ++V F+TK         +G+F AV +A+  V +GE  G+VGESGSGKST+  AL
Sbjct: 259 LLDARDVSVDFRTKLPGFSGWFRSGHFRAVADATVSVRQGETLGIVGESGSGKSTLAMAL 318

Query: 52  TGLAPIAGGTMTIGSHVPGEKINR---SFRRDVQMVFQDPYGALHPRFTVDQTLREPLSI 108
            GL   + G +       G    R   + R ++Q+VFQDP+ +L PR T+++ + E L++
Sbjct: 319 LGLQKTSHGAIEFQGRALGSYRGREQTALRSNMQVVFQDPFSSLSPRQTIERIVGEGLAL 378

Query: 109 N----GIDRQDKRIVDALNEVGLGPAYRFRYPHQLSGGQRQRVSIARALIVEPRVLLLDE 164
           +      D +  +++  L EVG+      RYPH+ SGGQRQR++IARAL++EPR+L+LDE
Sbjct: 379 HKPELAPDARRDKVISVLREVGIDRTALQRYPHEFSGGQRQRIAIARALVLEPRILILDE 438

Query: 165 PTSALDVSVQAEILNLLRRLHRERNLTMILVSHNLAVVGFLCSRVAVMRNGEIVEQCDIA 224
           PTSALDVS+Q ++L LL  L R+ NL  + +SH+LAV+G +  RVAVM+NGEIVE  ++ 
Sbjct: 439 PTSALDVSIQQQVLKLLAGLQRKYNLGFVFISHDLAVIGAMAHRVAVMQNGEIVETGEVD 498

Query: 225 SIRAQQVEHEYTRRLLLA 242
            I A+   H YTR+LL A
Sbjct: 499 QIFAEP-SHPYTRKLLKA 515



 Score =  144 bits (362), Expect = 5e-39
 Identities = 98/237 (41%), Positives = 139/237 (58%), Gaps = 18/237 (7%)

Query: 20  AVREASFHVGEGEVFGLVGESGSGKS----TILRALTGLAPIAGGTMTIGSHV--PGEKI 73
           AV + S  +G GE   LVGESGSGKS    +ILR L   A  +G     G  +    E+ 
Sbjct: 7   AVDDVSLAIGRGERVALVGESGSGKSVTALSILRLLND-AQTSGAVRFDGEDLLMKSERE 65

Query: 74  NRSFR-RDVQMVFQDPYGALHPRFTVDQTLREPLSIN-GIDRQD--KRIVDALNEVGLG- 128
            R  R  D+ M+FQ+P  AL+P +T+ + + E + ++ G+   +  KR V  L   G+  
Sbjct: 66  MRGLRGSDIAMIFQEPMTALNPLYTIGEQIAETIVMHDGVSAGEARKRAVALLERTGITE 125

Query: 129 PAYRFR-YPHQLSGGQRQRVSIARALIVEPRVLLLDEPTSALDVSVQAEILNLLRRLHRE 187
           P  R   YPHQLSGGQRQR  IA AL   PR+LL DEPT+ALDV+++A+I+ LL  L RE
Sbjct: 126 PGKRVNSYPHQLSGGQRQRAMIAMALACRPRLLLADEPTTALDVTIRAQIVELLLELQRE 185

Query: 188 ----RNLTMILVSHNLAVVGFLCSRVAVMRNGEIVEQCDIASIRAQQVEHEYTRRLL 240
               R + ++L++H+L +V     RVAVM  G +VE   + ++  +  +H YT+RLL
Sbjct: 186 EAEKRGMAVLLITHDLNLVRHFAQRVAVMEKGVLVESGPVETL-FESPQHPYTQRLL 241