Pairwise Alignments

Query, 260 a.a., ABC transporter from Burkholderia phytofirmans PsJN

Subject, 511 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  193 bits (490), Expect = 7e-54
 Identities = 108/236 (45%), Positives = 155/236 (65%), Gaps = 7/236 (2%)

Query: 11  FKTKTGYFEAVREASFHVGEGEVFGLVGESGSGKSTILRALTGLAPIAGGTMTIGSHVPG 70
           F +K+  F AV   +  + +G+  G+VGESGSGKST+ RAL  L    G      + + G
Sbjct: 268 FLSKSSKFRAVDSVNVDLHQGQTIGIVGESGSGKSTLGRALLRLIVSEGRIFFGKTEITG 327

Query: 71  --EKINRSFRRDVQMVFQDPYGALHPRFTVDQTLREPLSINGID----RQDKRIVDALNE 124
              K  R  RR +Q+VFQDPYG+L PR TV + + E L ++        +DKR ++AL E
Sbjct: 328 LDRKAMRPLRRHLQLVFQDPYGSLSPRQTVGEIITEGLFVHEQQLSRAERDKRAIEALKE 387

Query: 125 VGLGPAYRFRYPHQLSGGQRQRVSIARALIVEPRVLLLDEPTSALDVSVQAEILNLLRRL 184
           VGL PA R RYPH+ SGGQRQR++IARA+I++P V++LDEPTSALD SVQ ++++LLR L
Sbjct: 388 VGLDPAARNRYPHEFSGGQRQRIAIARAIILKPEVVILDEPTSALDRSVQGQVIDLLRDL 447

Query: 185 HRERNLTMILVSHNLAVVGFLCSRVAVMRNGEIVEQCDIASIRAQQVEHEYTRRLL 240
            +   L+ I +SH+L+V+  +   V VMRNG+IVE+ +  +I ++    EYT+ L+
Sbjct: 448 QKAHGLSYIFISHDLSVIKAISDYVIVMRNGKIVEEGETDAIFSRPTA-EYTKTLI 502



 Score =  146 bits (368), Expect = 1e-39
 Identities = 92/233 (39%), Positives = 137/233 (58%), Gaps = 13/233 (5%)

Query: 20  AVREASFHVGEGEVFGLVGESGSGKSTILRALTGLAPIAG---GTMTIGSH----VPGEK 72
           AV+     V +GE   +VGESGSGKS  +  + GL    G   G+     H    +P  +
Sbjct: 3   AVKGIDIDVKQGETLAVVGESGSGKSQTMMGIMGLLASNGIIEGSAKYRGHELIGLPVNE 62

Query: 73  INRSFRRDVQMVFQDPYGALHPRFTVDQTLREPLSIN--GIDRQDK-RIVDALNEVGLGP 129
           +N      + M+FQ+P  +L P + +   + EP+  +  G  RQ + R+++ L  VG+  
Sbjct: 63  LNDIRGAKITMIFQEPMTSLDPLYRIGAQIAEPIIYHRGGSKRQARARVLELLKLVGIPE 122

Query: 130 AYRF--RYPHQLSGGQRQRVSIARALIVEPRVLLLDEPTSALDVSVQAEILNLLRRLHRE 187
             R    YPH+LSGGQRQRV IA AL  EP +L+ DEPT+ALDV++QA+IL+LL+ L + 
Sbjct: 123 PERRIDSYPHELSGGQRQRVMIAMALANEPDILIADEPTTALDVTIQAQILDLLKSLQQR 182

Query: 188 RNLTMILVSHNLAVVGFLCSRVAVMRNGEIVEQCDIASIRAQQVEHEYTRRLL 240
             + ++L++H+L VV    +RVAVMR GEIVE      I  ++ + +YT+ LL
Sbjct: 183 FGMAVVLITHDLGVVRHFANRVAVMRRGEIVETGTTEDI-FERPQADYTKMLL 234